| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0044 |
|---|
| Symbol | |
|---|
| ID | 4416212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 42338 |
|---|
| End bp | 43129 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639668317 |
|---|
| Product | D-alanine transfer protein, short-chain dehydrogenase |
|---|
| Protein accession | YP_809713 |
|---|
| Protein GI | 116490169 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.170136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAA AAAATAAAAA AATTGTTGTG ACGGGCGGAA CTTCGGGGAT TGGATTAGCT
TTTGCCAAGA AATTGGCGGC TATCGACAAT CAGATAATTA TTGGCAGTCG TTCAAAAGAA
AAAATCACTG AAGTAGTTAA AGATAATAAG AATATCAGTG GTTACCAAGT AGATGTGAGC
GACCAGGAGA GCGTAGAGCG ATTTTACAAG CAGACAATTT CAGAATTTAA AAACATCGAT
ATTGTTATTA ATTCAGCTGG TATTATGAGA CATTATAATT TGCTTGATGA AAAAACAACT
TCTCAAAAAC TTCAAGCTGA GATCCAAACA AACTTGATTG GAACAATAAA TATTGACAAA
ATATTTCTGC CGATTTTACG TAAACAAGCA GAATCGATGA TCGTTAATAT AAGTTCCGGA
TTAGCCAATC TTAGTTCGGC AGCACATCCA ATATATTCAG CTACTAAAGC AGGCGTACAT
ATGTTTACTG ACGCTTTGAG GGAACAATTA CACTTTGCCG GCGAAGACCA TATTCATATA
GTGGAATTAG TACCTCCGCT GGTAGCTGAA ACAAATCTCG AAAAAGATGT TAATTCACAA
AATACACCAC TTAATATAAA ACTATCTGAC TTAATAAATG AAGCCATTCA AGGAATTGAA
GAAAATTCAA TCCGCATTAA TGCAGGTATG GCAAAAGAGA TGAGAAAGAT GGGCCAAACC
GATCCTGATA AAAACGAAAG AGAAATGGCA ACTATGATGA TTCCAATGTA TTTTCCTGAT
GGATTAAAGT GA
|
|---|
| Protein sequence | MELKNKKIVV TGGTSGIGLA FAKKLAAIDN QIIIGSRSKE KITEVVKDNK NISGYQVDVS
DQESVERFYK QTISEFKNID IVINSAGIMR HYNLLDEKTT SQKLQAEIQT NLIGTINIDK
IFLPILRKQA ESMIVNISSG LANLSSAAHP IYSATKAGVH MFTDALREQL HFAGEDHIHI
VELVPPLVAE TNLEKDVNSQ NTPLNIKLSD LINEAIQGIE ENSIRINAGM AKEMRKMGQT
DPDKNEREMA TMMIPMYFPD GLK
|
|---|
| |