Gene OEOE_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_0020 
Symbol 
ID4415412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp20423 
End bp21544 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content36% 
IMG OID639668293 
ProductABC-type sugar transport system, ATPase component 
Protein accessionYP_809679 
Protein GI116490145 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAATA TAGTTGTTAG TCATCTAACC AAAAAATACC CAAAGGCTGT TAAAGAAACT 
TTGAGCGATT CAAACTTTAC GATTGCTAAT GGCGAGTTTT GGGCAATTAT CGGCCCTTCA
GGATGCGGTA AATCAACTTT TTTAAGAATG CTTGCCGGTT TGGAACCTAT TAGTGGCGGA
ACAATTTCTG TTGATAATAA AGTAATTAAC AAATTGCCAC CCCAGCAACG CAAGATGGCA
ATGGTTTTTC AAGACTACGC TCTCTATCCG CACATGAATG TCTACGGAAA TATGGCTTTT
AACCTCAAGA TGAAGAAAAA AACAAAGAAA GAGATTGAAA CAAAAATTAA AAAAGCCGCT
AACGCCTTGG GACTTAATGA CTTATTAAAT AGAAAACCGG CTGAGCTTTC CGGTGGGCAA
AGGCAACGCG TTGCTTTGGG AAGAGCGATG GTCCGCGATC CCGATTTCTT TTTAATGGAC
GAACCATTAT CCAATCTTGA TGCTAAATTA CGAGTCGATA TGCGGAGCTT GATCATCAAG
CTGCATCATC AACTAAAAAC AACAACAATT TACGTAACAC ACGATCAGGC CGAAGCGATG
ACGATGGCCG ATCGAATTTT GCTTTTAAAT GACGGCGGCA TTCAGCAAGT TGGCACACCT
TTTGAGTTGT ACAATGCACC GGTTAATTTA TTTGTCGCTC AATTTATTGG ATCACCCAGC
ATGAATATAT TAAAGGGGAA ATTAGATTCC GGAAAGTTTT CTATCAATCA AAGTGATTTG
GATTTAAGTC ATATTTTACC CGATAAATTA AAAAATTATC AGGGATCAAT TTTAATTGGC
TTTCGACCAG AAAGTATCAA AAATATCCAA GTAGAGAAAG AAACAAAAAA CAAAAAAATA
TCAAACAACT TAAATCTACA AGGAAAATTG AATTTTATCG AATATCTTGG CGGACACAGC
TTGCTGTCGC TTGATATGTT TGGTCAAACA ATTATTATTC AAACCGAAAA AAACTTCTCG
AGAAATACTG ATAAAAATTT TCAGATTTCA ATTCCAAACA ACAAATTGTT TTACTTTGAT
CCCAAAAGTG GGAAGAATTT ATCACTTATG GAAGAAAAAT AA
 
Protein sequence
MPNIVVSHLT KKYPKAVKET LSDSNFTIAN GEFWAIIGPS GCGKSTFLRM LAGLEPISGG 
TISVDNKVIN KLPPQQRKMA MVFQDYALYP HMNVYGNMAF NLKMKKKTKK EIETKIKKAA
NALGLNDLLN RKPAELSGGQ RQRVALGRAM VRDPDFFLMD EPLSNLDAKL RVDMRSLIIK
LHHQLKTTTI YVTHDQAEAM TMADRILLLN DGGIQQVGTP FELYNAPVNL FVAQFIGSPS
MNILKGKLDS GKFSINQSDL DLSHILPDKL KNYQGSILIG FRPESIKNIQ VEKETKNKKI
SNNLNLQGKL NFIEYLGGHS LLSLDMFGQT IIIQTEKNFS RNTDKNFQIS IPNNKLFYFD
PKSGKNLSLM EEK