Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0013 |
Symbol | |
ID | 4415405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 13148 |
End bp | 15205 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639668287 |
Product | signal protein |
Protein accession | YP_809669 |
Protein GI | 116490139 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3887] Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT ATCATACTTT ACCATCGTTT ATTAAAAATT ATCGCGTCAT TTACTTGATC GCGGTTTTTA GCATACTAGC AATTTTCGGT TTTGTTTTTT CTTTGCATTT TGGTCCAATC GTTGCAGTTG CGTGGGTTAT TGTTGTCGCT CTAGCATCGA TTTTAATTTA CAGTTTGATT AATTCCTTGG GTGTCGACTT TCAAACCTAT ATGACCAAGT TGAATGGTCG GGTTTCAATC TCTCAAGCCA GTGCGCTTGA TCAGATGCCG ATTGGCGTGA TGCTTTTGAG TTCTCATGGA GAGATCGAAT GGGTTAACGA GAATTTGTTG AATATAATTG GCGATCGAAC AGTTCTTGGC AAAAAATTAA AAGATGTTGA TGCTGATTTA TACGAGCTGG TTCAATCAAA TAAAGACAGC GGAGAAACGG AAATCGATTG GCGCGACGGT AAGTTTTCTC TTCAAATTCA ACAAAATGGT CAAGTGATTT ATTTATTGGA TCTGACCGAT GTTTCCAGAT ACGAATTACT TTATGAAAAA GGTCGTCTCT TTTATGGCTT AATCAGCGTT GATAATTATG AAGAAATTAT TCAGGATGCT ACCGATTCCG AATCGAGTCG TTTAATTGCA TTCATTTCTG GACGCTTGGA CAACTGGGCA AAAAAGTATC ATTTATTTTT GCGGCGAATG TCGGCTGATC GCTATCTTTT CTTTGGCCGT CTGCCTGAAT TAAAATCATT GGAAGATGAT CGTTTTTCAA TTTTGGATAC TGTCCGTGAA GAATCTTTGA AACAAAATAT GCCCCTGTCC CTATCGGTTG GAATTGCCTT TGGTGTTTCC GACTTAAATG ATTTAGCCGA ACTTGCTCAT CGAAATCTTG ATCTGGCTCT TGGACGCGGC GGCGATCAAG TTGTCATTCG CGATAATGAT AATCCGGCGA TCTACTTCGG AGGTACATCT AATCCAATGG CTAAAAGAAC CCGTGTCCGT GCCCGGATGA TCGACCAGGC TTTATCTGAT TTGTTTAATA ATGCCGATTC AGTCTTTATT TCCGGTCATA AAAATGCCGA CATGGATTCG CTTGGAGCTG CTTTGGGCAT TTGGCGTATG AGTCGACTTC ATGATTTGAC GGCTTATATT ATTATCGATG ATCAAAATCT GCAACGGGAT GTAAAGTTGG TTATCGGAAA AATAAATGAC GAAGTTGATG CAGCCAACGA AAAACTAAAG AATCAGGCCA CTGATGGGAA AACACCGAAG TTAATCGAAC AGCCTTTTAT CACTGAAAAA AAAGCTTTGT CTCTGGCAAC CGACCAAAGT CTCTTGGTTT TGGTAGACCA TTCCCGTCCA AGCATTTCGG CCGCCGGTCA GTTGCTCGAA AAACTGAAAT CGTCATTGAT TGTAATTGAT CACCATCGAA TTGCTGACGA GAGTTTTTCT GAAAAGCCGA TTCTTTTTTA TGTCGAACAG TACGCTTCTT CTACTTGTGA ACTTGTAACC GAATTACTTG GTTATGAAGA TCGTCGTAAA TCGCCATTAA CCAAAGTTGA AGCAACAGCC TTGCTGGGTG GAATTCAATT GGATACAAAA GGGTTTACTT CTCACAGCGG GTCCAGAACC TTTGATGCGG CTAGTTTTTT GCGGGCAGCT GGAGCCGATG CGCAATTGCT CAGTAGTTTT GGCAAGGAAT CCAAGGACGA TTTATTGGTT AAATCCCATC TATTTGAATT AATGCAGTTG GACAGTAACA TCGCAACGGT CGTTGGTGAA AATGATGTTT TTTATAATCC TGTTTTGGCT GCTCAGGTAG CTGATGAATT ATTGAAAATT CAGGGTGTTT CGGCAAGTTT TGTTGTTAGC AGGCATCCTG ATGAAAAAGT TGGTATATCA GCTCGGTCGG ATGGATCGAT AAATGTACAA TTGATTATGG AAAAAATCGG TGGCGGCGGA TCATTGTCGA ACGCAGCCGT CCAAATGGAA TCCGATGATA TTCAAGAAGT TAAAAAAGTT CTTCAACAAG CTGTTTTGCA AATAACAGAC AACAAAGAAA AAGAATAG
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Protein sequence | MKKYHTLPSF IKNYRVIYLI AVFSILAIFG FVFSLHFGPI VAVAWVIVVA LASILIYSLI NSLGVDFQTY MTKLNGRVSI SQASALDQMP IGVMLLSSHG EIEWVNENLL NIIGDRTVLG KKLKDVDADL YELVQSNKDS GETEIDWRDG KFSLQIQQNG QVIYLLDLTD VSRYELLYEK GRLFYGLISV DNYEEIIQDA TDSESSRLIA FISGRLDNWA KKYHLFLRRM SADRYLFFGR LPELKSLEDD RFSILDTVRE ESLKQNMPLS LSVGIAFGVS DLNDLAELAH RNLDLALGRG GDQVVIRDND NPAIYFGGTS NPMAKRTRVR ARMIDQALSD LFNNADSVFI SGHKNADMDS LGAALGIWRM SRLHDLTAYI IIDDQNLQRD VKLVIGKIND EVDAANEKLK NQATDGKTPK LIEQPFITEK KALSLATDQS LLVLVDHSRP SISAAGQLLE KLKSSLIVID HHRIADESFS EKPILFYVEQ YASSTCELVT ELLGYEDRRK SPLTKVEATA LLGGIQLDTK GFTSHSGSRT FDAASFLRAA GADAQLLSSF GKESKDDLLV KSHLFELMQL DSNIATVVGE NDVFYNPVLA AQVADELLKI QGVSASFVVS RHPDEKVGIS ARSDGSINVQ LIMEKIGGGG SLSNAAVQME SDDIQEVKKV LQQAVLQITD NKEKE
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