Gene OEOE_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_0013 
Symbol 
ID4415405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp13148 
End bp15205 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content40% 
IMG OID639668287 
Productsignal protein 
Protein accessionYP_809669 
Protein GI116490139 
COG category[T] Signal transduction mechanisms 
COG ID[COG3887] Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT ATCATACTTT ACCATCGTTT ATTAAAAATT ATCGCGTCAT TTACTTGATC 
GCGGTTTTTA GCATACTAGC AATTTTCGGT TTTGTTTTTT CTTTGCATTT TGGTCCAATC
GTTGCAGTTG CGTGGGTTAT TGTTGTCGCT CTAGCATCGA TTTTAATTTA CAGTTTGATT
AATTCCTTGG GTGTCGACTT TCAAACCTAT ATGACCAAGT TGAATGGTCG GGTTTCAATC
TCTCAAGCCA GTGCGCTTGA TCAGATGCCG ATTGGCGTGA TGCTTTTGAG TTCTCATGGA
GAGATCGAAT GGGTTAACGA GAATTTGTTG AATATAATTG GCGATCGAAC AGTTCTTGGC
AAAAAATTAA AAGATGTTGA TGCTGATTTA TACGAGCTGG TTCAATCAAA TAAAGACAGC
GGAGAAACGG AAATCGATTG GCGCGACGGT AAGTTTTCTC TTCAAATTCA ACAAAATGGT
CAAGTGATTT ATTTATTGGA TCTGACCGAT GTTTCCAGAT ACGAATTACT TTATGAAAAA
GGTCGTCTCT TTTATGGCTT AATCAGCGTT GATAATTATG AAGAAATTAT TCAGGATGCT
ACCGATTCCG AATCGAGTCG TTTAATTGCA TTCATTTCTG GACGCTTGGA CAACTGGGCA
AAAAAGTATC ATTTATTTTT GCGGCGAATG TCGGCTGATC GCTATCTTTT CTTTGGCCGT
CTGCCTGAAT TAAAATCATT GGAAGATGAT CGTTTTTCAA TTTTGGATAC TGTCCGTGAA
GAATCTTTGA AACAAAATAT GCCCCTGTCC CTATCGGTTG GAATTGCCTT TGGTGTTTCC
GACTTAAATG ATTTAGCCGA ACTTGCTCAT CGAAATCTTG ATCTGGCTCT TGGACGCGGC
GGCGATCAAG TTGTCATTCG CGATAATGAT AATCCGGCGA TCTACTTCGG AGGTACATCT
AATCCAATGG CTAAAAGAAC CCGTGTCCGT GCCCGGATGA TCGACCAGGC TTTATCTGAT
TTGTTTAATA ATGCCGATTC AGTCTTTATT TCCGGTCATA AAAATGCCGA CATGGATTCG
CTTGGAGCTG CTTTGGGCAT TTGGCGTATG AGTCGACTTC ATGATTTGAC GGCTTATATT
ATTATCGATG ATCAAAATCT GCAACGGGAT GTAAAGTTGG TTATCGGAAA AATAAATGAC
GAAGTTGATG CAGCCAACGA AAAACTAAAG AATCAGGCCA CTGATGGGAA AACACCGAAG
TTAATCGAAC AGCCTTTTAT CACTGAAAAA AAAGCTTTGT CTCTGGCAAC CGACCAAAGT
CTCTTGGTTT TGGTAGACCA TTCCCGTCCA AGCATTTCGG CCGCCGGTCA GTTGCTCGAA
AAACTGAAAT CGTCATTGAT TGTAATTGAT CACCATCGAA TTGCTGACGA GAGTTTTTCT
GAAAAGCCGA TTCTTTTTTA TGTCGAACAG TACGCTTCTT CTACTTGTGA ACTTGTAACC
GAATTACTTG GTTATGAAGA TCGTCGTAAA TCGCCATTAA CCAAAGTTGA AGCAACAGCC
TTGCTGGGTG GAATTCAATT GGATACAAAA GGGTTTACTT CTCACAGCGG GTCCAGAACC
TTTGATGCGG CTAGTTTTTT GCGGGCAGCT GGAGCCGATG CGCAATTGCT CAGTAGTTTT
GGCAAGGAAT CCAAGGACGA TTTATTGGTT AAATCCCATC TATTTGAATT AATGCAGTTG
GACAGTAACA TCGCAACGGT CGTTGGTGAA AATGATGTTT TTTATAATCC TGTTTTGGCT
GCTCAGGTAG CTGATGAATT ATTGAAAATT CAGGGTGTTT CGGCAAGTTT TGTTGTTAGC
AGGCATCCTG ATGAAAAAGT TGGTATATCA GCTCGGTCGG ATGGATCGAT AAATGTACAA
TTGATTATGG AAAAAATCGG TGGCGGCGGA TCATTGTCGA ACGCAGCCGT CCAAATGGAA
TCCGATGATA TTCAAGAAGT TAAAAAAGTT CTTCAACAAG CTGTTTTGCA AATAACAGAC
AACAAAGAAA AAGAATAG
 
Protein sequence
MKKYHTLPSF IKNYRVIYLI AVFSILAIFG FVFSLHFGPI VAVAWVIVVA LASILIYSLI 
NSLGVDFQTY MTKLNGRVSI SQASALDQMP IGVMLLSSHG EIEWVNENLL NIIGDRTVLG
KKLKDVDADL YELVQSNKDS GETEIDWRDG KFSLQIQQNG QVIYLLDLTD VSRYELLYEK
GRLFYGLISV DNYEEIIQDA TDSESSRLIA FISGRLDNWA KKYHLFLRRM SADRYLFFGR
LPELKSLEDD RFSILDTVRE ESLKQNMPLS LSVGIAFGVS DLNDLAELAH RNLDLALGRG
GDQVVIRDND NPAIYFGGTS NPMAKRTRVR ARMIDQALSD LFNNADSVFI SGHKNADMDS
LGAALGIWRM SRLHDLTAYI IIDDQNLQRD VKLVIGKIND EVDAANEKLK NQATDGKTPK
LIEQPFITEK KALSLATDQS LLVLVDHSRP SISAAGQLLE KLKSSLIVID HHRIADESFS
EKPILFYVEQ YASSTCELVT ELLGYEDRRK SPLTKVEATA LLGGIQLDTK GFTSHSGSRT
FDAASFLRAA GADAQLLSSF GKESKDDLLV KSHLFELMQL DSNIATVVGE NDVFYNPVLA
AQVADELLKI QGVSASFVVS RHPDEKVGIS ARSDGSINVQ LIMEKIGGGG SLSNAAVQME
SDDIQEVKKV LQQAVLQITD NKEKE