| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0012 |
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| Symbol | rpsR |
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| ID | 4415404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Oenococcus oeni PSU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008528 |
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| Strand | + |
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| Start bp | 12725 |
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| End bp | 13045 |
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| Gene Length | 321 bp |
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| Protein Length | 106 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639668286 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_809667 |
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| Protein GI | 116490138 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0166504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCGAAG AACATTCAAA TCAAAGAAGT CAGACCTTTA ATGGCGAACG TACTAATCGT
CCAAGCCGCA AACCTCGTGG CGACGGTGAA AGACGTGGAC GTCGTCAAGG TGGACGTCGT
CGTGTTGATT ACTTAGCTGT TAATCATATC GATTATGTCG ACTATAAGGA CACTGAATTG
CTTCAACGTT TCATCGCCGA CAATGGCAAA ATTTTACCGC GTCGGATTAC TGGCACAAGC
TCTAAAAATC AACGTAAAAT TGCTACGGCA ATCAAGCGTG CGCGTATTAT GGCTTTGCTT
CCATTCGTTG CAAACAACTG A
|
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| Protein sequence | MAEEHSNQRS QTFNGERTNR PSRKPRGDGE RRGRRQGGRR RVDYLAVNHI DYVDYKDTEL
LQRFIADNGK ILPRRITGTS SKNQRKIATA IKRARIMALL PFVANN
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