Gene OEOE_0005 details

Gene Information

• Locus tag: OEOE_0005
• ID: 4415397
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Oenococcus oeni PSU-1
• Kingdom: Bacteria
• Replicon accession: NC_008528
• Strand: +
• Start bp: 4101
• End bp: 6059
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 639668279
• Product: DNA gyrase subunit B
• Protein accession: YP_809655
• Protein GI: 116490131
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.986745
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGATT TAAAAAAAAA TAATCAAGTA GCTCCTAGTG ACAATAACTC TTATGGTGGG 
TCTTCCATCC AAATTTTGGA GGGACTTGAA GCGGTTCGCA AACGACCGGG AATGTATATT 
GGTTCGACTG CAAGTTCCGG TTTGCATCAT TTGGTTTGGG AAATTATCGA TAATGGAATC 
GATGAAGCAC TGGCTGGTTT TGCCCATCAT GTTACTTTGA CGATTGAAAA AGATAATTCG 
ATTACGATTA CCGATGATGG CCGTGGTGTT CCGGTCGAAA TTCAGCCTAA AACCGGGCGT 
CCGGCTATGG AAGCTGTTTT TACGATTCTG CATGCCGGTG GTAAATTCGA TTCGAAAAGT 
TATAAAGTTT CCGGTGGGCT TCATGGTGTT GGCGCTTCGG TTGTTAATGC TTTGTCAAAG 
GAAATGGACG TCAGAGTCTA TCGGGACAAC AAAATCTATT ACATGGATTT TGAACGCGGC 
CACATTAAGA CAGAAATGAA ATTGCTCGAT GAACCAATGC GCCTTAAACG CGGCACAATT 
GTTCACTTTG CTCCGGACCC GGATATTTTC CGGGAAACAA TCGTGTTTGA TTATCGAACC 
CTTGCAAGCC GAATTCGCGA ATTGGCTTTT TTGAATAAAG GGCTGCGTCT TTCTACAACC 
GATAAAAGAG TTGATCCTGT AAAAAATGAA TCATTTATGT ATGAGGGTGG AATTGCCGAG 
TACGTCAAAT TTTTAAATAA AAACAAGCAA CCGCTTTTTC CTGAACCGGT TTATGTCGAA 
GGGGAAGAAA ACGGTATTCA AGTTGAGGTC GCTTTGCAGT ATACCGATGC CGTCGCCGAA 
ACCCTGATGA GTTTTACTAA TAATATCCAT ACTCATGAAG GTGGTACGCA CGAGACCGGT 
TTTAAAATGG CTTTGACAAG AATTATTAAT GATTATGCCA AGAAAAAAGG TATTTTGAAA 
GATTCCGATG ATCCGCTGAG TGGTGAGGAT GTCCGAGAAG GAATTACGGC AATTGTTTCA 
ATCAAACATC CCGATCCGCA ATTTGAAGGG CAGACAAAAA CCAAGTTGGG CAATACAGAT 
GCCCAGCAGG TTGTAAATCA TCAGTTCTCA ACGATTTTTA ATCGTTTTAT GATGGAGAAC 
CCGGAAACTG CCAGAGCGAT CGCTAACAAA GGATTAATCG CTTCTAAAGC ACGTGCCGCT 
GCCAAGAAAG CACGTGATTT GACGCGTAAA AAGTCCGGAC TGGAAATTAG TGCTTTAGCT 
GGAAAATTAG CAGATAATAC TTCCCGCGAC CCAGAGATTT CCGAATTGTT TATCGTCGAG 
GGGGATTCAG CCGGCGGTTC CGCCAAGCAA GGCCGTTCTC GTTTGACACA GGCTATTTTA 
CCGATTCGTG GAAAAATTTT GAATGTTGAA AAAGCTACTT TGGATAAGGT CCTGGCTAAC 
GAAGAAATCA GGTCTTTATT TACGGCGATG GGAACCGGTT TTGGCGAAGA ATTCGATATT 
AGCAAGGCTC ATTATCACAA GGTAATTATT ATGACTGATG CCGATGTCGA TGGAGCGCAT 
ATCAGAACCC TGCTTTTAAC TTTGTTCTTT AGATATATGC GTCCTTTGAT TGACGCCGGC 
TATATTTATA TTGCTCAACC ACCTTTGTAT GGAGTCGCGA TCGGAAATTC GGATCAGCGT 
GTGTACCTTG ATTCCGATGA GGAACTTGAT CAATATACTG CTACACTGCC GGCAAGTCCT 
AAACCACGGA TTCAGCGATA CAAGGGTCTT GGTGAAATGG ATGCCGTTCA GCTTTGGGAT 
ACAACTATGG ATCCAAAACA TCGTCGTCTC TTGCGTGTCG ATCCGGAATA TCAACCGGAA 
GTCGATACAA CTTTCGACAT GCTGATGGGT GACCGGGTTG AACCAAGACG TGAATTTATC 
GAAGATAATG CTCAATTTGT TGAAGATTTG GATGTGTGA 

 

Protein sequence

MVDLKKNNQV APSDNNSYGG SSIQILEGLE AVRKRPGMYI GSTASSGLHH LVWEIIDNGI 
DEALAGFAHH VTLTIEKDNS ITITDDGRGV PVEIQPKTGR PAMEAVFTIL HAGGKFDSKS 
YKVSGGLHGV GASVVNALSK EMDVRVYRDN KIYYMDFERG HIKTEMKLLD EPMRLKRGTI 
VHFAPDPDIF RETIVFDYRT LASRIRELAF LNKGLRLSTT DKRVDPVKNE SFMYEGGIAE 
YVKFLNKNKQ PLFPEPVYVE GEENGIQVEV ALQYTDAVAE TLMSFTNNIH THEGGTHETG 
FKMALTRIIN DYAKKKGILK DSDDPLSGED VREGITAIVS IKHPDPQFEG QTKTKLGNTD 
AQQVVNHQFS TIFNRFMMEN PETARAIANK GLIASKARAA AKKARDLTRK KSGLEISALA 
GKLADNTSRD PEISELFIVE GDSAGGSAKQ GRSRLTQAIL PIRGKILNVE KATLDKVLAN 
EEIRSLFTAM GTGFGEEFDI SKAHYHKVII MTDADVDGAH IRTLLLTLFF RYMRPLIDAG 
YIYIAQPPLY GVAIGNSDQR VYLDSDEELD QYTATLPASP KPRIQRYKGL GEMDAVQLWD 
TTMDPKHRRL LRVDPEYQPE VDTTFDMLMG DRVEPRREFI EDNAQFVEDL DV