| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2547 |
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| Symbol | trmE |
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| ID | 4432127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 2379669 |
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| End bp | 2381036 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639668212 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_812088 |
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| Protein GI | 116513181 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACATTAA CACAAGAATT TGATACGATT GCGGCGATTT CGACACCGCT TGGTGAAGGA
GCAATTGCCA TTGTTCGTTT ATCAGGAACA GATGCCCTGA AAATTGCTCA ATCTGTCTAT
AAAGGAAAAA ATTTAGCTCA AGTTGCTAGC CATACGATTA ATTACGGCCA CATCTTTGAA
GAAGAACGTC TGGTTGACGA AGTGATGGTT TCAGTCATGC GTGCGCCTAA AACTTTCACT
CGTGAAGATA TTGTTGAAAT CAACACACAC GGTGGGATTG CAGTCACACA AGAAATCTTG
CAATTACTTT TACGTAATGG TGCAAGACTT GCTGAACCTG GTGAATTTAC CAAGCGTGCT
TTCTTAAATG GACGGATTGA CTTGGCACAA GCTGAGTCTG TCATGGATTT AATCCGCGCA
AAAACCGATA AAGCAGCGAA TATTGCCGTA AAACAACTTG ACGGAAGTCT CTCAAAAATG
ATTAATAATA TTCGTCAAGA TATTCTCGAA AGTTTAGCAC AAGTCGAGGT CAATATTGAT
TATCCAGAGT ATGATGATGT AGAAACTATG ACTTCACAAA TGCTCCTTGA AAAGACTGCT
CATTTTGAAC AGCTTTTGGA AAATCTTTTA TCAACAGCTA AACGCGGAAA AATTTTGCGC
GAAGGCTTAA AAACGGCCAT TATTGGACGT CCAAACGTTG GAAAATCAAG CTTACTCAAT
CAATTATTAC GTGAAGAAAA AGCCATTGTC ACTGACATTG CTGGAACAAC ACGTGATGTT
ATTACCGAGT TTGCCAATAT TGGTGGCGTA CCTCTTGAAT TAGTAGACAC CGCTGGGATT
CGTGAAACAG ATGATTTAGT CGAAGCGATT GGGGTTGAAC GTTCTAAAAA GGCCTTAGCC
GAAGCTGATT TGGTTTTGCT AGTTTTGGAC GCCTCACTGG AATTGACTGA TAAAGATTTG
GAACTTTTAG AGCTATCTAA AAATGCCAAT CGTATTGTTT TACTTAACAA AACTGATTTG
CCCGAAAAAC TTGATATTAA TCAAATTTCC GGTGATTTTA TTCGAATTTC AGCCCTTAAA
AATGAGAATT TATCTGCTGT TGAAGAAAAA ATCAATCAAA TTTTCTTCGC TGGTGAGATT
GAAGCCAAAG ACGCAACCGT CTTATCAAAT GCTCGTCACA TTTCGCTTGT TGAAGAAGCT
TTAAAAGCAC TCAAGGAAGC AAATAACGGG CTTGCTCTTG GCTTACCTGT TGATTTGATT
CAAGTCGATG TCACACGTTG TTGGCAATTA CTTGGAGAAA TCACAGGCGA AGCCGCTCCT
GATGAATTGA TTACACAACT TTTCTCACAA TTTTGTTTAG GGAAATAA
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| Protein sequence | MTLTQEFDTI AAISTPLGEG AIAIVRLSGT DALKIAQSVY KGKNLAQVAS HTINYGHIFE
EERLVDEVMV SVMRAPKTFT REDIVEINTH GGIAVTQEIL QLLLRNGARL AEPGEFTKRA
FLNGRIDLAQ AESVMDLIRA KTDKAANIAV KQLDGSLSKM INNIRQDILE SLAQVEVNID
YPEYDDVETM TSQMLLEKTA HFEQLLENLL STAKRGKILR EGLKTAIIGR PNVGKSSLLN
QLLREEKAIV TDIAGTTRDV ITEFANIGGV PLELVDTAGI RETDDLVEAI GVERSKKALA
EADLVLLVLD ASLELTDKDL ELLELSKNAN RIVLLNKTDL PEKLDINQIS GDFIRISALK
NENLSAVEEK INQIFFAGEI EAKDATVLSN ARHISLVEEA LKALKEANNG LALGLPVDLI
QVDVTRCWQL LGEITGEAAP DELITQLFSQ FCLGK
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