| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2545 |
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| Symbol | |
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| ID | 4432125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 2377776 |
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| End bp | 2378504 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639668210 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_812086 |
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| Protein GI | 116513179 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGACTAG ATAAATTTTT AGCAGAAAGT GGCCTCGGAA GCCGGAGTGA AGTCAAAGTT
TTATTGAAAA AAGGGCGCGT GACCGTTGCT GGTGAAATTC AGCGAGATGG CAGATTTCAA
GTGGATAAGA ATTCCAGACA GGTGGCTTTT GACGGTCAAA TTTTAGATTA CCAAGAATAT
TATTATTACT TATTGAATAA ACCGCAAGGA GTCGTATCCG CTACGAAAGA TAATGTTTTT
AAAACAGTTG TTCAACTTTT ATCAGAAAAA GATTTTCGTA AGGATATTTT CCCGGTCGGA
CGTTTAGATA AAAATACCGA AGGACTTTTG ATTTTAAGCA ATGATGGGGC TCTTGGCCAT
GATTTAACTC AACCCAAAAA ACACGTTGAA AAAGAATATT TTGCACGAAT TGATGGAAAA
GTTACTGACG AGATTATCAA TAAATTTGCT GAAGGTTTGA CTTTGAAAAA TGGTGAAAAA
GCAAGACCAG GAGAATTATT TGTTGAGAAA ACTTACAAAG GCGATAGCCA ATCCGGCTGG
GTCAGTGAAA TTCGAGTTAT TATTCATGAA GGAAAATTCC ACCAAGTCAA ACGGATGTTT
GAGGCAGTTG AGATGTATGT CCTTTATCTC AAACGAATTC GGATGGGCAA TTTAGCTTTG
GATTCAGATT TAGCTCTGGG AGCTTATCGT CCTTTAACAA TCGAAGAGAT TGAAAACTTA
AAAAAATAA
|
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| Protein sequence | MRLDKFLAES GLGSRSEVKV LLKKGRVTVA GEIQRDGRFQ VDKNSRQVAF DGQILDYQEY
YYYLLNKPQG VVSATKDNVF KTVVQLLSEK DFRKDIFPVG RLDKNTEGLL ILSNDGALGH
DLTQPKKHVE KEYFARIDGK VTDEIINKFA EGLTLKNGEK ARPGELFVEK TYKGDSQSGW
VSEIRVIIHE GKFHQVKRMF EAVEMYVLYL KRIRMGNLAL DSDLALGAYR PLTIEEIENL
KK
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