Gene LACR_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2508 
Symbol 
ID4434150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp2341348 
End bp2341836 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content35% 
IMG OID639668174 
ProductGAF domain-containing protein 
Protein accessionYP_812051 
Protein GI116513144 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC AAGAAAAAAT CGAAGGTTAT GAGTTGCTTA ATTTGCAACT AAAAGCACTG 
TTGAGTGAAC AAAATTATAC ACTCTCGAAT TTAGCAAATG CAAGTAGTTT GCTTTGGAGC
TTCTTGCCTG AGCAAGTCTA CACTGGTTTT TATCTATATA ATGGGGATAA ACTAATTTTA
GGACCCTTTC AAGGTTCAGT TTCTTGTGTT GAAATTGTGA TGGGTAAAGG AGTTTGTGGA
GAAGCAGCTC AAACTCGTCA AACAATGATT GTTGAAGATG TAAAAAAACA CAAAAATTAT
ATTTCCTGTG ACGGACGTGC GATGTCTGAA ATTGTGGTAC CAATGGTTAA AGATGGCAAC
TTGGTGGGAG TTCTTGATTT GGACAGCTCT GAGGTTGGTT TTTATGATGA AATTGACCAA
AAATACCTTG AAGAATTTGC TAGTATTTTA TGTGACATGA CCGATTTTAA ATTTTTCGAA
GTAGGTTAA
 
Protein sequence
MNKQEKIEGY ELLNLQLKAL LSEQNYTLSN LANASSLLWS FLPEQVYTGF YLYNGDKLIL 
GPFQGSVSCV EIVMGKGVCG EAAQTRQTMI VEDVKKHKNY ISCDGRAMSE IVVPMVKDGN
LVGVLDLDSS EVGFYDEIDQ KYLEEFASIL CDMTDFKFFE VG