| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2429 |
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| Symbol | polC |
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| ID | 4433035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 2252691 |
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| End bp | 2257598 |
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| Gene Length | 4908 bp |
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| Protein Length | 1635 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639668100 |
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| Product | DNA polymerase III PolC |
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| Protein accession | YP_811985 |
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| Protein GI | 116513078 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01405] DNA polymerase III, alpha chain, Gram-positive type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAATC TTTTTGAGAA ATTGATGGAT CAGATCAAAA TGCCACCAAA CTTGCGTCGT
TCTAGACAGT TTGAGCATGC TGATATTGAA AATGTTGAAG TGCATACGGC AAGTAAGCTC
TGGCACTTTC AGTTAATTTT TGACGAGATT TTACCAATTG ACACATATAA ATTACTGACA
GAATTGACAG AGACAGCTTT TTCTACAATC GCTCGTACAG AAATTTCTGT CAGTAGCCGT
GAAATAGTCA TTGACGAGCA AAACCTTAAT GATTATTATC AATATGCGCT GACACTTCCT
GAACTTTGTG ATTCTGCTTT TTCAAGTATT TTTAAGAAAT ATCATCTTGA ATTGCAGGAA
GAAAAAATTC AGTTGATGGT TGAAGATAAT CCACGAATGG ACTTTTTTGT TGAAAAATAC
TTTCCAATTT TAGAAGAAAA ATTCGCAGAT TTTGGTTTCG GAAAATTAAA AATTATTCCA
GTGGTTGATC AACAATTAAC CGACTTACAG GTGGCTGCTC ATGCCGAAAA AGTAGCCGCT
CGCTTGGCCG CTCAAACGGC AGAGCAAGCT CAAGTTTCGG AGCTTAAAAA ACAACGCTCA
GAGGAACGTG AAAGTAAAAA TACTAGAGAA GCCAAACCAG AATTTGTAGA GACGGCACTT
TCTGATGGGA TTTTCTTTGG TCGAAAAATT AGTGGACAAA GTCCAATTAC CAGTATGTCT
TTCATCGCTG GGGAAGGCTT TGGGGTTATC TTTGAAGGTC TTGTTTTTGA GGCCGCACAT
CGCGAATTTA CAGGAAAAGA ATCAGGTAAA GTCAATCATA TTTTAGAATT GAAAATGGCT
GATGAAACAT CAACCTTTAT GATTTCCAAA TGGGGTCGTA AGGACGAAGA AATTGCACAA
TTTGACCAAA TTGTCAGCAC CGTTAAAGCC ATGAATGAAA AAATTCTTAC TGACGGAGCG
GATAATTTTA CTGACAGCCT ATCTGATGCC CTTTGGTTAC GTGTGCAAGG AAATATTGAA
CACGACAAAT ATAAAGATGA CTTAGTAATG ACGGCAAATG CGGTTGTTGA AATTAAACCT
AAACCAACCA TTGACCGTGT GGCTCTCCAA ATCAAAGCTG TAAAATCAGA TAAAATTCAA
CTGGGTCGTG AAATCAAAAA TAATGAGCCA GTCACTCCGA TGCGTTCTGT CAGTGAATTT
TCTACTAACG GTCCTGTTGT TTTTGAAGGT TATGTCTTCA AAGGGGAACT CCGCGAAATC
AAATCACGTA AAACAGGAAA CATCAGTTAT CTTCTTGAAT TTGAAATGAC TGATTACACG
TCAAGTTTTT ATGTGCAAAA GTGGTTACGT GGCGAAGAAG AAATTCAATT GGCCAAACAA
ATTAAAGCGG GACTATGGTG TCGAGTTCGC GGGAATGTTC AACGGGACAA TTTCAAAAAT
GATTTAGTGC TACAATTGAC TGATTTGATT GAAATTCCGA CACAAAATGT TCGTGAAGAT
AAGTCTGATG AAAAACGTGT TGAGTTTCAT GCCCATACTA ATATGAGTCA AATGGACGCG
ATTCCGTCCG CTTCAAGTTT AGTTGCTCAG GCTGCAAAAT GGGGACATAA AGCCATTGCA
ATTACTGACC ATGGGGGCTT GCAATCTTTC CCTGAGGCTC ACTCGGCAGG TAAAAAGAAT
GGGGTCAAGA TTATTTATGG AGTCGAGGCC AATCTTGTCG AAGACAAAAT CCCAATTGTA
TTTAATGAAA CAGATGTTGA TATGTATGAA TCAACATATG TCGTCTTTGA CGTCGAAACA
ACAGGTCTTT CAGCAGTTCA TAATGATTTG ATTCAAATTG CAGCAACAAA AATGCACAAA
GGAAATCCCA TTGATGAATT TGATGAATTT ATTAATCCGG GTTATCGTTT AAGCGAATTT
ACAACAGAAC TAACCGGAAT TACTGATGAC CATGTCAAAA ATGCGAAACC GCTTTATGAA
GTACTGACGA AATTTCAAAA ATTTTGCGAA GGAACAATTC TTGTCGCTCA TAATGCATCC
TTTGACGTGG GCTTCATGAA TATGAACTAT TCACGAAATG GGCTGCCGAT TATTAGTCAA
CCTGTCGTTG ATACTCTTGA ATTTGCCCGT AATCTCTATC CCGAAATGAA ACGTTTTGGT
TTAGGACAAT TGACCAAGAA GTTTCAAATC GGACTTGAAC ATCACCATAT GGCCAATTTT
GATGCGGAAG CAACTGGGCG TTTGCTCTTT GTATTCTTGG AAGAATTACG GACCAGAAAC
ACAGGGTGGA CAAGTCTGTT AGAACTTAAT GCCAAGTTGG TCAGTGAAGA TTCTTATAAA
AAAGTACGAC CAAAACACGT GACTTTATAT GCTAAAACAC AAGAAGGACT TAAAAATCTC
TTCAAGATTG TTAGTTTTGA AAATGTGAAA TATTATGCTG GTCTTCCTCG TCTTCCTCGG
TCAGTTTTGG AAGCCAATCG CGAGGGATTA CTTGTTGGTT CAGCCTGTGA AGTCGGCGAA
GTCTTCGATG CAGCGATTAA TAAAACTTTT GAAGAAACGC TTGAAATTGC TAAATTTTAT
GATTTCATTG AAGTTTTCCC ACCAGCACTT TATCGCTCAC TTGTTGTCGG CGGCTCTTTC
AAATCAGAAA AAGAATTGGA ACAAACGCTT AAAGATTTGA TAAAAATCGG AAAAACGCTT
GTCAAGCCAG TTCTGGCCAC AGGAAATCTC CATTATCTGA ATCCGGAAGA TGCCATTTAT
CGTGAAATTA TTGTCCGCTC ACTTGGTCTT GGGGCAGAAA TTAACTGGAC ACAAGGACAC
GGGGAGCATG CAAAACCTCT TCCATTACCT GAAGCTCACT TTAGAACAAC TGATGAAATG
CTTGAAGCCT TTAGTTTTCT TGATGAAAAA ACAGCGCGTG AAATTGTCAT TGACAATACC
CAAAAAATGG CTGATGAGTT CGATGTTCTC ACTCCTGTTC GTGATGATTT ATATACACCT
AAAATGGTCT TTGACGGAGG AGAAACCTCA GAAGAGCGGA TTGTTCGCTT GACTTATGAA
AAAGCCCACG AGTGGTATGG AAATCCATTG CCAGATATTA TTGATGCAAG GCTTGAAAAA
GAACTGCGAT CGATTTTGGG GAATGGTTTC TCAGTCGTGT ATATTATTTC GCAAGAACTT
GTAAAACGTT CCAATGAGCG CGGATATATT GTTGGTTCTC GGGGATCAGT AGGTTCGTCA
CTGGTTGCGA CCATGATTGG AATAACCGAA GTAAATCCAC TGGCACCTCA TTACCGTTGC
CCAGAATGTC AATATTTTGA ATGCTATGAT GATGGATCTT TCGGTTCAGG TTATGATATG
CCGGATAAAA ATTGTCCTAA ATGTGACCAC AAACTCATCA AAGATGGGCA TGATATTCCT
TTTGAAACTT TCTTAGGTTT CAAGGGAGAC AAAGTTCCCG ATATTGATTT GAACTTTTCA
GGGGATGACC AACCTTTGGC TCACTTGGAC GTTCGTGATA TTTTCGGGGA AGATTACGCT
TTTCGGGCAG GAACAATTGG TACGGTTGCC GAAAAAACGG CTTTTGGTTT CGTCAAAGGC
TACGAACGTG ACTATGACCA ATTTTATGGC AATGCTGAAA TTGACCGTTT AGCTGCCGGA
TCGACGGGTG TCAAGCGAAC AACAGGTCAA CACCCAGGAG GGATTATTGT TATTCCAAAT
TACATGGATG TTTATGATTT TTCTCCAGTT CAATTTCCAG CCGACGATGT CAATGCCGAA
TGGCAAACGA CTCACTTTGA TTTCCATGCC ATTCATGATA ATATCTTGAA ACTCGATATT
CTTGGACATG ATGATCCAAC GATGATTCGA AAATTGCAAA GTCTTTCTGG TATTGTTCCT
CAAGACATTC CGATGGATGA CCCCGGAGTG ATGAAACTTT TCACCGGGAC AGAATCTTTA
GGTTTGACCG AAGAGCAATT GGGAGTAAAA CTCGGGACTC TTGGAATTCC TGAAATGGGA
ACTTTTACCT CAATGAATAT GATTGCCGAA GCCAAACCCA AAAACTTTGC TGATTTACTG
CAAATTTCTG GACTTTCCCA TGGAACAGAC GTATGGTCAG GAAATGCCCA AGATTTAATT
CGTTCAGGAA TTGCCGACCT TTCAAGTGTT ATCGGTTGTC GGGATGATAT TATGGTCTAT
CTCATCCATA AAGGACTTGA AAATGGTCTT GCTTTTACAA TTATGGAGCG TGTACGTAAG
GGAATGTGGA ATAAAATTCC TGCCGAAGAA CGTGAGAAAT ATGTGGAAGC CATGCGAGAA
CATGAGGTTC CAGAATGGTA TATTGAGTCT TGTTCTAAGA TTAAATATAT GTTCCCTAAA
GCCCATGCGG CAGCTTATAT TATGATGGCT CTGCGGGTGG CTTATTTCAA AGTACATCAT
CCAATTTTCT ATTACTGCGC ATGGTTCTCT ATCAGGGCAA CGGCCTTTGA TATTGGTGTC
ATGGGGGCTG GTCTTGAAGC AGTCAAATCA AAAATGAAAG AAATTAAGGA TAAAGGTTTT
GAGGCTACAA ATGTGGAAAC TAACCTTTAT ACAACTTTGG AACTCTGTAA TGAAATGTTA
GAGCGTGGCT TCACTTTTGG TAAAATTGAC CTTTACCGCT CTGAGGCTAC GGAGTTTGTC
ATTGACGGTG ACACTTTGAT TCCGCCATTT GTAACGATGG ACGGATTGGG TGAAAACGTG
GCAAAACAAA TCGTCGCAGC GCGTGCTGAG GGTGAATTTT TGAGTAAGAT GGAACTTCGT
AAACGTGGGG GAGTTTCACA AACCATTATT GAAAACATGA CCAATATGGG CGTTCTTGAA
GGTATGCCTG ATGATAATCA ATTAAGCTTA TTTGATGATT TCTTTTGA
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| Protein sequence | MENLFEKLMD QIKMPPNLRR SRQFEHADIE NVEVHTASKL WHFQLIFDEI LPIDTYKLLT
ELTETAFSTI ARTEISVSSR EIVIDEQNLN DYYQYALTLP ELCDSAFSSI FKKYHLELQE
EKIQLMVEDN PRMDFFVEKY FPILEEKFAD FGFGKLKIIP VVDQQLTDLQ VAAHAEKVAA
RLAAQTAEQA QVSELKKQRS EERESKNTRE AKPEFVETAL SDGIFFGRKI SGQSPITSMS
FIAGEGFGVI FEGLVFEAAH REFTGKESGK VNHILELKMA DETSTFMISK WGRKDEEIAQ
FDQIVSTVKA MNEKILTDGA DNFTDSLSDA LWLRVQGNIE HDKYKDDLVM TANAVVEIKP
KPTIDRVALQ IKAVKSDKIQ LGREIKNNEP VTPMRSVSEF STNGPVVFEG YVFKGELREI
KSRKTGNISY LLEFEMTDYT SSFYVQKWLR GEEEIQLAKQ IKAGLWCRVR GNVQRDNFKN
DLVLQLTDLI EIPTQNVRED KSDEKRVEFH AHTNMSQMDA IPSASSLVAQ AAKWGHKAIA
ITDHGGLQSF PEAHSAGKKN GVKIIYGVEA NLVEDKIPIV FNETDVDMYE STYVVFDVET
TGLSAVHNDL IQIAATKMHK GNPIDEFDEF INPGYRLSEF TTELTGITDD HVKNAKPLYE
VLTKFQKFCE GTILVAHNAS FDVGFMNMNY SRNGLPIISQ PVVDTLEFAR NLYPEMKRFG
LGQLTKKFQI GLEHHHMANF DAEATGRLLF VFLEELRTRN TGWTSLLELN AKLVSEDSYK
KVRPKHVTLY AKTQEGLKNL FKIVSFENVK YYAGLPRLPR SVLEANREGL LVGSACEVGE
VFDAAINKTF EETLEIAKFY DFIEVFPPAL YRSLVVGGSF KSEKELEQTL KDLIKIGKTL
VKPVLATGNL HYLNPEDAIY REIIVRSLGL GAEINWTQGH GEHAKPLPLP EAHFRTTDEM
LEAFSFLDEK TAREIVIDNT QKMADEFDVL TPVRDDLYTP KMVFDGGETS EERIVRLTYE
KAHEWYGNPL PDIIDARLEK ELRSILGNGF SVVYIISQEL VKRSNERGYI VGSRGSVGSS
LVATMIGITE VNPLAPHYRC PECQYFECYD DGSFGSGYDM PDKNCPKCDH KLIKDGHDIP
FETFLGFKGD KVPDIDLNFS GDDQPLAHLD VRDIFGEDYA FRAGTIGTVA EKTAFGFVKG
YERDYDQFYG NAEIDRLAAG STGVKRTTGQ HPGGIIVIPN YMDVYDFSPV QFPADDVNAE
WQTTHFDFHA IHDNILKLDI LGHDDPTMIR KLQSLSGIVP QDIPMDDPGV MKLFTGTESL
GLTEEQLGVK LGTLGIPEMG TFTSMNMIAE AKPKNFADLL QISGLSHGTD VWSGNAQDLI
RSGIADLSSV IGCRDDIMVY LIHKGLENGL AFTIMERVRK GMWNKIPAEE REKYVEAMRE
HEVPEWYIES CSKIKYMFPK AHAAAYIMMA LRVAYFKVHH PIFYYCAWFS IRATAFDIGV
MGAGLEAVKS KMKEIKDKGF EATNVETNLY TTLELCNEML ERGFTFGKID LYRSEATEFV
IDGDTLIPPF VTMDGLGENV AKQIVAARAE GEFLSKMELR KRGGVSQTII ENMTNMGVLE
GMPDDNQLSL FDDFF
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