Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2404 |
Symbol | |
ID | 4433831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 2231961 |
End bp | 2233250 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639668078 |
Product | hypothetical protein |
Protein accession | YP_811963 |
Protein GI | 116513056 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.146193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA ATAAAGAAAT ATTAAAATTC GCCCTTCCTG CGATTATTGA AAATTTCTTG CAAATGTTAG TTGGTGTGAG TGATACAATG ATTGTTGCTC ACCTTAGTCT TTCTGCTGTG GCCGCAGTTT CTCTTGCGAA TAATTTAATT ACGGTATATC AGGCAATATT TATCGCCCTA GGAACAATTA TTTCAAGTTT ATTTGCCAAG GTACTTATTG AAAAAAAGGC AAAAGAAAAG CTAAAGGAAT TAATTAATTC TGCAACTAAA CTCACCGTTT TAATCGGTTT AGTTTTTGGT CTATTTTCCC TTTTTGCTGC TCAACCGATT CTTTATTTGT TGGGGGCTCG TCAGCAAGTT TTAGAACTTT CAATCATTTA TCTGAGTTTA GTGGGTGGTT TGATTGTTCT TTTAGCTTTA ATGACAACTT TTGGAGCCTT TTTACGGGCT GATGGAAATA CAAAGACACC CATGTGGGCG TCTTTCTTTG CAAGTGTTCT AAATTTATTA TTTTCAATTG TTTTTATCTT TGTTTTTCAT TTAGGCGTCT TAGGAACGGC ACTTGGAGCA GTTCTTGCCA GAGTAATTGG GACAGCTTTC CTCTATTATA AATTAAAAGA AAAACGGCCC AGTCTTCAAT TTTATAAAGT AAAACTCAAT CGTCAGTTAA TCAAGCTAAG TCTACCTGCG GCAGGAGAAA GATTATCCAT GAGATTGGGT GATTTATTAA TCATGATGAT TATTGTCCGT TTAGGAGAAC GTGTCTTTGC GGGGAATGCA ATTGGCGAGA GCATTACACA ATTTAATTAT ATGCCAGTCT TTGGAATGGC AACCGTGACA GTGATTTTAG TAGCACAGGC AACCGCTGAA AATAATATTG AAAATATTAA ATCTTACATC AAAAAAACTT ACTGGTTGGC AACAAGTATG ATGTTTGTCA TTGGATTAGT TCTTTTACTG ACAGCCAATA TGCTAAATCA TTTATTTACT ACTGATAGGA TTGCCATGGG CGCAAGTACG ATAGTCATCT TATTTTCTTT TTTAGCGACT TTCTTCGTCA CAGGAGCGAC GACTTACACG GCGGCTTTTC AAGGAATTGG AAATACCAAA CTTCCGTTTT ATGCAACAAC TTTAGGCATG TTTGGCATTC GGTTAATCTT AGGCGCATTT TTAGCTTTAG TATTGAAGCT AGGCTTAGAA GGTGTTTGGT TAGCGGTCTT GCTTGATAAC TTTTTTAGAT TCGTTTTTCT TAAGATAAAA TTTAAGAAAA CACTCATAAC AGAAATTTAA
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Protein sequence | MKTNKEILKF ALPAIIENFL QMLVGVSDTM IVAHLSLSAV AAVSLANNLI TVYQAIFIAL GTIISSLFAK VLIEKKAKEK LKELINSATK LTVLIGLVFG LFSLFAAQPI LYLLGARQQV LELSIIYLSL VGGLIVLLAL MTTFGAFLRA DGNTKTPMWA SFFASVLNLL FSIVFIFVFH LGVLGTALGA VLARVIGTAF LYYKLKEKRP SLQFYKVKLN RQLIKLSLPA AGERLSMRLG DLLIMMIIVR LGERVFAGNA IGESITQFNY MPVFGMATVT VILVAQATAE NNIENIKSYI KKTYWLATSM MFVIGLVLLL TANMLNHLFT TDRIAMGAST IVILFSFLAT FFVTGATTYT AAFQGIGNTK LPFYATTLGM FGIRLILGAF LALVLKLGLE GVWLAVLLDN FFRFVFLKIK FKKTLITEI
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