Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2396 |
Symbol | rpsC |
ID | 4433823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 2227014 |
End bp | 2227667 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639668070 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_811955 |
Protein GI | 116513048 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0132783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTCAAA AAGTACATCC AATAGGAATG CGTGTTGGCG TTATTCGTGA TTGGGATGCC AAATGGTATG CTGAAAAAGA ATATGCGGAT TACCTTCACG AAGACTTGGC AATTCGTCAA CTTATCCAAA CTAAACTTGC TGATGCATCA GTATCATTGA TTGAAACTGA ACGTGCAATT AACAAAGTTA TTGTAACTTT GCACACTGCT AAACCAGGTA TGGTTATTGG TAAATCAGGA GCTAACGTTG ATGCACTCCG TGCAGAACTC AACAAACTTA CTGGTAAACA AGTTCACATC AACATCGTTG AAATCAAAAA ACCTGATTTG GACGCTCATC TTGTTGGTGA AGGAATTGCT AAACAACTTG AAGCACGTAT CGCTTTCCGT CGTGCTCAAA AACAAGCCAT CCAACGTGCT ATGCGCGCTG GTGCAAAAGG GATCAAAACT CAAGTTTCTG GTCGTTTGAA TGGTGCTGAT ATTGCCCGTG CTGAAGGATA TTCAGAAGGT ACAGTTCCAC TCCACACACT CCGTGCGGAC ATCGACTACG CTTGGGAAGA AGCAGATACA ACTTATGGTA AACTCGGCGT TAAAGTTTGG ATCTACCGTG GTGAAGTTCT CCCTACTAAA AAATCTGTGA AAGGAGAAAA ATAA
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Protein sequence | MGQKVHPIGM RVGVIRDWDA KWYAEKEYAD YLHEDLAIRQ LIQTKLADAS VSLIETERAI NKVIVTLHTA KPGMVIGKSG ANVDALRAEL NKLTGKQVHI NIVEIKKPDL DAHLVGEGIA KQLEARIAFR RAQKQAIQRA MRAGAKGIKT QVSGRLNGAD IARAEGYSEG TVPLHTLRAD IDYAWEEADT TYGKLGVKVW IYRGEVLPTK KSVKGEK
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