Gene LACR_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2396 
SymbolrpsC 
ID4433823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp2227014 
End bp2227667 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content42% 
IMG OID639668070 
Product30S ribosomal protein S3 
Protein accessionYP_811955 
Protein GI116513048 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0132783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTCAAA AAGTACATCC AATAGGAATG CGTGTTGGCG TTATTCGTGA TTGGGATGCC 
AAATGGTATG CTGAAAAAGA ATATGCGGAT TACCTTCACG AAGACTTGGC AATTCGTCAA
CTTATCCAAA CTAAACTTGC TGATGCATCA GTATCATTGA TTGAAACTGA ACGTGCAATT
AACAAAGTTA TTGTAACTTT GCACACTGCT AAACCAGGTA TGGTTATTGG TAAATCAGGA
GCTAACGTTG ATGCACTCCG TGCAGAACTC AACAAACTTA CTGGTAAACA AGTTCACATC
AACATCGTTG AAATCAAAAA ACCTGATTTG GACGCTCATC TTGTTGGTGA AGGAATTGCT
AAACAACTTG AAGCACGTAT CGCTTTCCGT CGTGCTCAAA AACAAGCCAT CCAACGTGCT
ATGCGCGCTG GTGCAAAAGG GATCAAAACT CAAGTTTCTG GTCGTTTGAA TGGTGCTGAT
ATTGCCCGTG CTGAAGGATA TTCAGAAGGT ACAGTTCCAC TCCACACACT CCGTGCGGAC
ATCGACTACG CTTGGGAAGA AGCAGATACA ACTTATGGTA AACTCGGCGT TAAAGTTTGG
ATCTACCGTG GTGAAGTTCT CCCTACTAAA AAATCTGTGA AAGGAGAAAA ATAA
 
Protein sequence
MGQKVHPIGM RVGVIRDWDA KWYAEKEYAD YLHEDLAIRQ LIQTKLADAS VSLIETERAI 
NKVIVTLHTA KPGMVIGKSG ANVDALRAEL NKLTGKQVHI NIVEIKKPDL DAHLVGEGIA
KQLEARIAFR RAQKQAIQRA MRAGAKGIKT QVSGRLNGAD IARAEGYSEG TVPLHTLRAD
IDYAWEEADT TYGKLGVKVW IYRGEVLPTK KSVKGEK