Gene LACR_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2341 
Symbol 
ID4432796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp2186372 
End bp2187241 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content40% 
IMG OID639668020 
Productglycerol uptake facilitator related permease (major Intrinsic protein family) 
Protein accessionYP_811906 
Protein GI116512999 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.395885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTTA CATGGACAGT GAAATATATC ACTGAATTTG TTGGAACTGC CCTACTCATT 
ATTATGGGTA ATGGTGCGGT TGCTAACGTT GAACTTAAAG GTACAAAAGC TCACGCACAA
TCTTGGATGA TTATTGGTTG GGGTTACGGA CTTGGCGTAA TGTTGCCAGC AGTTGCTTTT
GGTAATATTA CTTCACAAAT CAACCCAGCT TTCACACTTG GACTTGCAGC CTCAGGACTT
TTTCCTTGGG CACACGTTGC TCAATACATT ATTGCGCAAG TATTAGGTGC GATGTTTGGA
CAATTATTAA TCGTTATGGT TTATCGTCCA TACTATCTTA AAACACAAAA TCCAAATGCT
ATTCTTGGAA CTTTCTCAAC TATCGACAAC GTTGATGATA ACAGTGAAAA AACTCGTTTG
GGAGCAACCA TTAATGGTTT CTTGAATGAG TTCTTAGGTT CATTTGTATT GTTCTTCGGT
GCGGTTGCTG CGACAAATAT CTTCTTTGGT AGTCAATCAA TTACTTGGAT GACAAACTAC
TTGAAAGGTC AAGGAGCAGA TGTTTCTTCA TCAGACGTTA TGAATCAAAT TTGGGTTCAA
GCATCAGGAG CTTCAGCTTC TAAAATGATT GCTCACTTGT TCCTAGGATT CCTTGTTATG
GGACTCGTAG TTGCACTTGG TGGACCTACA GGTCCTGGTT TGAATCCGGC GCGTGACTTT
GGTCCACGTT TGGTTCACAG TCTCTTACCA AAATCAGTTT TGGGTGAAGC TAAAGGTTCA
TCTAAATGGT GGTATGCATG GGTTCCAGTT TTGGCACCAA TTCTTGCATC ACTTGCAGCC
GTTGCATTAT TTAAAATGAT TTATCTTTAA
 
Protein sequence
MDVTWTVKYI TEFVGTALLI IMGNGAVANV ELKGTKAHAQ SWMIIGWGYG LGVMLPAVAF 
GNITSQINPA FTLGLAASGL FPWAHVAQYI IAQVLGAMFG QLLIVMVYRP YYLKTQNPNA
ILGTFSTIDN VDDNSEKTRL GATINGFLNE FLGSFVLFFG AVAATNIFFG SQSITWMTNY
LKGQGADVSS SDVMNQIWVQ ASGASASKMI AHLFLGFLVM GLVVALGGPT GPGLNPARDF
GPRLVHSLLP KSVLGEAKGS SKWWYAWVPV LAPILASLAA VALFKMIYL