| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2316 |
|---|
| Symbol | |
|---|
| ID | 4434450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 2159636 |
|---|
| End bp | 2161129 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639667998 |
|---|
| Product | amino acid transporter |
|---|
| Protein accession | YP_811884 |
|---|
| Protein GI | 116512977 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACA AGAAAACAAA AGGGATTAGC CTTTTTGCAC TACTAGCGAT TATCATCTCA
GGAGCCATTG GTGGTGGAGT GTTCAACCTT GCCAATGACT TGGCAAGAGG CTCAACTCCT
GGGGGAGTCG TGATTTCATG GCTTTTTATT GGTTTTGGAA TATTAATGTT AGTTTTGAGT
TTTAATCGGC TCATTACAAT AAAACCTGAT CTTTCTGGTG TATCAGATTA TGCTCGAGCA
GGTTTTGGGG ACTTTGTAGG TTTTTTATCG GGCTGGGGTT ACTGGATTTC AGCATGGACA
GGAACAATTG GTTTTGCTGT TTTAATGATG ACTTCTGCTG ATTATTTCTT TCCTGGTAAA
TTTGCAAATT CAAACGGTTC ACTAACTATT CTGTCAGTAA TTATTGTGTC AATTATTTCA
TGGATATTGA TGCTTCTAGT TGATCGAGGA GTAGAAACGG CTGCGGCTGT AAATGCAATT
GTGATGATTG CCAAACTGAT TCCATTGGTT GTTTTCTCAA TTACAGGAAT TATCTTATTT
AAGGCTAATA TCTTTACTCA ACATTTTTGG CAAACCTTTA CAACGAATTT TGCTGCTGAT
GGTTCAGTCA AAGATTTTGT TTGGCACGCA ATGACTGCAA GTGGACTTTT AAGTCAAATT
AAGGGCTCAT TGTTGGTAAT GGTTTGGGTC TTTGTCGGGA TTGAGGGTGC TGCGATGATG
GGAAATCGCG CGAAAAAGAA ATCAGATACA GCAAAAGCAA CAGTTATTGG TTTAGCAGTT
TTGCTTGTTA TTTATGTACT TTTGTCACTC CTTCCTTATG GTTATATGGA TCAAGCAAGT
TTAGCAAATG TCAAAGCCCC TGGTCTTGTT TACATTCTTA ATGAAATGGT CGGTGGCTGG
GGTGGTAGCC TTATGGCAGT CGGTCTAATG ATTTCATTAT TAGGAGCATG GCTTTCATGG
ACAATGCTAC CGGTTGAAGC TACACAACAG TTGGCAGAGC AAAAGCTATT GCCAAGTTGG
TTTGGTAAAC TCAATAAATA TCATGCCCCA AGTAATTCAT TGTTGATTAC TCAGTTGATG
ATTCAAATCT TTATTATCAT TACATATTTT GTCGCAAATG CTTATAATGT TTTTATTTAT
ATGGCAACAG CCGTAATAAT GATTTGCTAT GCTTTAGTTG GTGCCTATCT TTTCAAAATT
GGTCTTAAAG AAGCATCAGT AAAAAATATA CTGATTGGTT TCTTCACTTT TGCTTTTCAG
GCTCTGGCAC TCTACCTCTC AGGCTGGCAA TATGTTTGGC TGGCTATGAT TCTATATACA
ATTGGATTTC TTTTGTTCAT TGGAGCAAAA AAAGAGAGTC ATCAATCAAT ATCAGTCAAA
GAATGGTTGG GGATGCTTGT TGTGACAGTA CTTGGGGTAT TAGCGATTGT GGTCTTGATT
TGTGGGGCCA AAGCGGGAAC AGGCTTTGAC CTTCGAGGAT TACTAGGATT TTAG
|
|---|
| Protein sequence | MENKKTKGIS LFALLAIIIS GAIGGGVFNL ANDLARGSTP GGVVISWLFI GFGILMLVLS
FNRLITIKPD LSGVSDYARA GFGDFVGFLS GWGYWISAWT GTIGFAVLMM TSADYFFPGK
FANSNGSLTI LSVIIVSIIS WILMLLVDRG VETAAAVNAI VMIAKLIPLV VFSITGIILF
KANIFTQHFW QTFTTNFAAD GSVKDFVWHA MTASGLLSQI KGSLLVMVWV FVGIEGAAMM
GNRAKKKSDT AKATVIGLAV LLVIYVLLSL LPYGYMDQAS LANVKAPGLV YILNEMVGGW
GGSLMAVGLM ISLLGAWLSW TMLPVEATQQ LAEQKLLPSW FGKLNKYHAP SNSLLITQLM
IQIFIIITYF VANAYNVFIY MATAVIMICY ALVGAYLFKI GLKEASVKNI LIGFFTFAFQ
ALALYLSGWQ YVWLAMILYT IGFLLFIGAK KESHQSISVK EWLGMLVVTV LGVLAIVVLI
CGAKAGTGFD LRGLLGF
|
|---|
| |