Gene LACR_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2275 
Symbol 
ID4433271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp2127625 
End bp2128806 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content35% 
IMG OID639667958 
Productintegrase 
Protein accessionYP_811844 
Protein GI116512937 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTA AAGAATATAT AAAAAAAGAC GGTACAAAGG TGTACCGAAC TAACGTTTAT 
TTGGGTGTGG ATAATCTCAC AGGTAAGCAA GTACGAACAA GTGTAAGTGC CAATAGTAGA
AAAATGTGTG ATATTAAAGC ACGCCAAGCT ATAAATAAGT TTATCAATAA TGGGTCTACA
ATTGCAAGGG AAAAAGTGGT TTTTGATAAC TTTGAATCTT TGGCTTTGAG TTGGTTTGAG
AGTTATAAGC TGACAGTTAA GGAAAATAGT ATAAGTGTTG CTGATAATTA CTTACGTAAT
TATATACTAC CTCCTATTGG CTCGTATAAG CTCTCTAAGA TAACGCCAAT GTTATTACAG
GAACTTGTCA ATAAATGGGC TAATAACGCA AATACAGCCG AAATAATCAA CGGTAAGCGT
GAGCGAGGAA AATGTAAGGA TTATAAGCTA CTTCTTAACT TTATAAAACG TATCCTTGAT
TATGGTATGC AATTAGGAGC TATCGAGGAC AATTCAGCTA TAAAGGTTTT CCCTCCTAAG
TTAAAGACAA GGACAGTTAA AAAGATTAAG TATTTTGATA ATGAGGAGCT AAAACAATTC
TTGTTGTATC TTGATACTTT AGAACCAAGC ACGGACAATC GAAAGAGTAA GACTTTATAC
AAACTACTTC TTGCAACTGG CTTACGTGTA GGGGAGGCTA TGGCTCTTTC TTGGTCTGAT
ATTGATTTTA ACAACCATTA TCTCAGTGTG TCTAAAACTC TAATTCAACA AAGCAATTTG
ATACAGGATA GCGCAAAGAC AAAAGAGAGT AATCGTTCTG TGTTTTTGGA TAACGACACT
CTTGAAAGTT TAAAAGAATG GCGGAAATAT CAAAATGACG GTGCTATATC CTTGCATGAC
TCTTTAGTCT TCTCATATCA TCAAAAAATG AGGTCTTATG AAATAGAGAG ACAGAAATTA
GTGAGACACT TCAAAAATGC TGGAGTACCT AACATTGGCT TTCACGGTTT CCGTCATACT
CACGCTAGTC TTTTGATGAA CAACGATGTT AACCCTAAAG AGATACAAAG ACGATTAGGA
CATGCAGATT ATGCTATCAC AATGAATACA TATAGCCACC TTGCCAAAAG TAAAGAAAAA
GAGACCGCTG AAAAGTTCAG CAGTATCTTA AAAGCATTAT GA
 
Protein sequence
MNIKEYIKKD GTKVYRTNVY LGVDNLTGKQ VRTSVSANSR KMCDIKARQA INKFINNGST 
IAREKVVFDN FESLALSWFE SYKLTVKENS ISVADNYLRN YILPPIGSYK LSKITPMLLQ
ELVNKWANNA NTAEIINGKR ERGKCKDYKL LLNFIKRILD YGMQLGAIED NSAIKVFPPK
LKTRTVKKIK YFDNEELKQF LLYLDTLEPS TDNRKSKTLY KLLLATGLRV GEAMALSWSD
IDFNNHYLSV SKTLIQQSNL IQDSAKTKES NRSVFLDNDT LESLKEWRKY QNDGAISLHD
SLVFSYHQKM RSYEIERQKL VRHFKNAGVP NIGFHGFRHT HASLLMNNDV NPKEIQRRLG
HADYAITMNT YSHLAKSKEK ETAEKFSSIL KAL