| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2238 |
|---|
| Symbol | recF |
|---|
| ID | 4433856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 2097880 |
|---|
| End bp | 2098959 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639667921 |
|---|
| Product | recombination protein F |
|---|
| Protein accession | YP_811807 |
|---|
| Protein GI | 116512900 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCA AGCAAATTGA ACTTAAAAAT TTTCGAAATT ATGAAGATTT AAAACTCGAC
TTCCATCCCA ATCTCAATAT CTTCTTGGGT CAAAATGCTC AAGGAAAGAC AAATATTCTT
GAAGCTATTC ACTTTTTAGC CCTTACTCGT AGTCACAGAA CGAGTCATGA CAAAGAGTTA
ATTTGTTGGT CTGGGCAAGA AATGAAAGTT TCAGGATTGG TTGAAAAGGC TCATGCAACC
GTTCCTCTTG AAGTTCAATT AAGTTCCAAA GGACGAATTG CTAAGGCTAA TCATCTGAAG
GAAAATCGCT TGGCTGATTA TATCGGACAA CTAAAAATCT TGATGTTTGC GCCTGAAAAT
TTAGAATTGG TCAAAGGTTC GCCAGCCACT CGCAGACGAT TTATGGATAT TGAACTCGGA
CAAATTCACG CTGTTTATCT TTATGATTCC ATGCGTTATA ATCGCGCTTT AAAAGAGCGA
AATGCTTATT TGAAATTTGA CCAAGCAAAG ATTGATAAAA ACTTTTTGAC GGTTCTTGAT
GAACAATTGG CTGAACACGG CAATAAAATC ATGTTTGAAC GTAAAACTTT CATTGAAAAG
CTTGAAATTC ATGCAAAAAA AATTCATGAA CAGTTAACTC ATGGTTTGGA AACATTAAAA
ATCACTTATA ATCAAAATGT AAAAACTGAT TTTTCAAAAG AATTATTGAG TCGACAAGAT
CATGATATTT TTAGACATCA GACCACCGTC GGTCCCCATC GAGATGATTT ACAGTTCTTT
ATCAATGAGA TCAATGTTGC TGATTTTGGT AGTCAGGGAC AACAACGAAC CGTTGCTCTT
TCGATTAAAT TGGCCGAAAT TGATTTGATT TTTGAGGAAA CGGGTGAGTA TCCTATTTTA
CTTTTAGACG ATGTCATGAG TGAACTTGAC AATCATCGTC AGCTGGATTT GATTGAAACA
AGTTTAGGTA AAACCCAGAC TTTTATTACC ACAACCACTC TTGACCATCT CAAAAATTTA
CCGGAAAATT TGAGTATTTT CCATGTTACT GATGGGACAA TTGAGAAAGA AAAAGAATAA
|
|---|
| Protein sequence | MKLKQIELKN FRNYEDLKLD FHPNLNIFLG QNAQGKTNIL EAIHFLALTR SHRTSHDKEL
ICWSGQEMKV SGLVEKAHAT VPLEVQLSSK GRIAKANHLK ENRLADYIGQ LKILMFAPEN
LELVKGSPAT RRRFMDIELG QIHAVYLYDS MRYNRALKER NAYLKFDQAK IDKNFLTVLD
EQLAEHGNKI MFERKTFIEK LEIHAKKIHE QLTHGLETLK ITYNQNVKTD FSKELLSRQD
HDIFRHQTTV GPHRDDLQFF INEINVADFG SQGQQRTVAL SIKLAEIDLI FEETGEYPIL
LLDDVMSELD NHRQLDLIET SLGKTQTFIT TTTLDHLKNL PENLSIFHVT DGTIEKEKE
|
|---|
| |