Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2228 |
Symbol | hisS |
ID | 4432719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 2087571 |
End bp | 2088863 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639667911 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_811797 |
Protein GI | 116512890 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTC AAAAACCAAA AGGAACAGCA GATTTATTAC CTGCTGAAAC TGCAAAATGG CAGTATATCG AAGAAATTGC TCGTGGCGTT TTTAATGATT ATAATTTCAA AGAGATTCGT ACCCCGATGT TTGAAAGCTA TGAACTCTTT AGTCGTGCCA CTGGTGAAAC CAGTGATATT GTTACTAAAG AAATGTATGA TTTCGAGGAT AAAGGTGGAC GTCATATTGC CCTTCGTCCA GAGGGAACAG CATCAGCCGT TCGTGCTTAC ATCGAAAATA AACTCTATGC TCCAGAAGTT GTGAAACCAG TAAAACTTTG GTATGATGCT CCAATGTTTC GTTATGAACG TCCACAATCA GGACGTTTAC GTCAATTCCA CCAATTTGGT GTAGAATGCT TAGGCTTGAA AAATTCAGCG GTCGATGTAG AAATTATTGC GATGGCTGAT ACGCTTTTCC GTCAATTAGG CATTTCTGGG GTGAAGCTTT CGCTCAACAC ATTAGGGGAT ATGGAAAGCC GTAAGGCATA TCGACAAGCT TTGATTGATT ATTTGACTCC GTTTGAAAAT CAACTTTCAG AAGATAGCCG TCGTCGTTTA AATGAAAATC CTTTACGAGT GTTGGATAGT AAAGAAGCAG AAGATATCGC AATTGTGAAA AATGCCCCTG CTATCTTGGA CTATCTCAAT GAAACTTCAA AAGCTTATTT TGAAGAAGTA AAAGCCTTAC TCGAAGCTTT GAACATCGAA TATACCATTG ACTCAAATAT GGTTCGTGGT TTAGATTACT ATAATGATAC AATTTTTGAA TTCATTGTTA ATTTTGATGG TAAAGAACTA ACTGTTTGTG GTGGTGGACG TTATGATGGT CTAGTAGAGT ATTTTGATGG TCCAGCCACT CCAGCCTTCG GTTTTGGTTT AGGTATCGAA AGACTCCTAA TGATTGCCGA AAAACAAGAA ATTAACTTTA TTCCTGAGGA AACTTTGGAT GTTTACATTG CTGTAATGGG TGAAAAAGCT AATCTTGAAG CAACAAAATT GGCTGAGAGT TTACGCGAAC AGGCCTTTAA AGTCGAACGT GATTTTTCAA ATCGTAAACT TGGAGCACAA TTTAAAACTG CCGAAAAATT GGGAGCAGAA TTGATTATTA CACTTGGAGA AGATGAAGTT CGCACAGGAC AAATCAAAGT GAAACATAAT CAAACACGTA AACAAGTAGA AACAACACTT AAAGCGGTTC ACGAATCATT TGCCCCAATT TTTGAAGAAA TTTACGCTGA CGAGATAAAC TAA
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Protein sequence | MKLQKPKGTA DLLPAETAKW QYIEEIARGV FNDYNFKEIR TPMFESYELF SRATGETSDI VTKEMYDFED KGGRHIALRP EGTASAVRAY IENKLYAPEV VKPVKLWYDA PMFRYERPQS GRLRQFHQFG VECLGLKNSA VDVEIIAMAD TLFRQLGISG VKLSLNTLGD MESRKAYRQA LIDYLTPFEN QLSEDSRRRL NENPLRVLDS KEAEDIAIVK NAPAILDYLN ETSKAYFEEV KALLEALNIE YTIDSNMVRG LDYYNDTIFE FIVNFDGKEL TVCGGGRYDG LVEYFDGPAT PAFGFGLGIE RLLMIAEKQE INFIPEETLD VYIAVMGEKA NLEATKLAES LREQAFKVER DFSNRKLGAQ FKTAEKLGAE LIITLGEDEV RTGQIKVKHN QTRKQVETTL KAVHESFAPI FEEIYADEIN
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