Gene LACR_2204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2204 
Symbol 
ID4434188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp2069038 
End bp2069577 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content33% 
IMG OID639667888 
ProductPadR family transcriptional regulator 
Protein accessionYP_811774 
Protein GI116512867 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0586729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCATA GAGATAAATT ATCTTATATT ATATTGGGAC TTTTAAAGAC AGAACCCTTA 
AGCGGTTACG ACCTTAAAAA AAAGTTTGAA AGTGAAGTGG GGGAATTTTG GCAAGCCAAT
ACAGGGCAAA TTTATCCTTC ATTGAGAGTA TTATTAAATG ATCAGGCTGT AACTTTTGAC
GTCCATATCG TAGGTGAAAA GTTAGAGAAA AAAACTTATC AAATTACTCC AAAGGGAATC
CAACTTTTCA ATGAGTGGTT GAAACATCCC GTTGATCGTT ACCCAATCCA AAAGGACGAG
TTTATGCTCC GTCTTTATTT CCTTGATGAT AAAAATGAAG AAAACCTCCT TAAATTAATC
GAGGAAGAAA GCATCGTTCA TCAGAAAAAA TTGGACTATC TCATTAGACG CCAAAAAAAT
CTTTTTGGTG AGTCTGAGGA AAATAAAAAG AGCGGTCATT ATCTTGTTTT AGATTTTGCT
ATAAAAAGAG AAACCTTCAA AAAAGAATGG TTAGACTCAT TGCTTAAAGA TTTGAAATAA
 
Protein sequence
MSHRDKLSYI ILGLLKTEPL SGYDLKKKFE SEVGEFWQAN TGQIYPSLRV LLNDQAVTFD 
VHIVGEKLEK KTYQITPKGI QLFNEWLKHP VDRYPIQKDE FMLRLYFLDD KNEENLLKLI
EEESIVHQKK LDYLIRRQKN LFGESEENKK SGHYLVLDFA IKRETFKKEW LDSLLKDLK