| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2185 |
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| Symbol | upp |
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| ID | 4432070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 2048797 |
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| End bp | 2049432 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639667872 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_811758 |
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| Protein GI | 116512851 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0012098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAAT TTCAAGTCGT AGAACATCCA TTGATTCAAC ACAAACTCTC AATCTTGCGT
CGTAAAGAGG CGTCAACAAA AGAATTCCGT GAGCTTGTTG ACGAAATCGG AATGCTTATG
GCCTACGAAG TATCAAGAGA TTTACCTCTC GAAGATGTCG AAATTGAAAC ACCTGTTCAA
AAAACGACAG TTAAACAAAT CGCGGGTAAA AAATTAGCGA TTGTGCCAAT CTTACGTGCA
GGTATCGGGA TGGTTGATGG GATTTTGAAA TTAATTCCAG CTGCTCGTGT GGGACATATC
GGAATGTACC GTGATGAAGA AACACTTAAA CCAGTTGAGT ATTTAGTAAA ACTTCCAGCA
GATATTGCTG ACCGTCAAAT TTTCCTTGTT GACCCAATGC TTGCAACAGG TGGTTCAGCA
ATTTTGGCAG TTGATTCTCT TAAAAAACGT AATTCTAAAG CAGAAAATAT TAAATTCGTT
TGTCTTGTTG CCGCACCAGA AGGTGTAAAA GCCCTTCAAG AAGCACATCC AGATATCGAA
ATTTATACAG CAGCTTTGGA TGAAAAACTT AATGAACATG GTTATATCGT TCCAGGTCTT
GGTGACGCTG GTGACCGTTT GTTCGGTACA AAATAA
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| Protein sequence | MSKFQVVEHP LIQHKLSILR RKEASTKEFR ELVDEIGMLM AYEVSRDLPL EDVEIETPVQ
KTTVKQIAGK KLAIVPILRA GIGMVDGILK LIPAARVGHI GMYRDEETLK PVEYLVKLPA
DIADRQIFLV DPMLATGGSA ILAVDSLKKR NSKAENIKFV CLVAAPEGVK ALQEAHPDIE
IYTAALDEKL NEHGYIVPGL GDAGDRLFGT K
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