| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2159 |
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| Symbol | |
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| ID | 4433994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 2025206 |
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| End bp | 2026801 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639667848 |
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| Product | phosphodiesterase |
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| Protein accession | YP_811745 |
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| Protein GI | 116512838 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATTA TTTCTATCGT TCTCTTGGTC TTATTGGTTG TATTAGTTGT CGCATTTATT
TTTTGTGCCC AAAATATTAA GAAAAATAAG CAAGATGCTG AATCTCTTTT TAACGAAGCA
GAAAATAAAG CAAATGAGGT GATGGCGAGT GCTAAACGTG AGGCGGAGTC TTTGAAAAGG
GAGGCTGAAG CCTTCAAAAA AGAAGCCCGT TACACCCTTC GTGAAGAAGA ACAAAAGCAA
CGTCGCGAAA TCGAAGATGA ATTTAAGCAG GAACGTCAGG AGTTAAAGGA GACTGAAAAG
CGCCTAAAAC AACGTGAAGA AATCTTAGAC CGTAAGGATG ATACCTTAAC GAAAAAAGAA
GAAAACTTAG ATTCTAAAGA GGAAAACCTC GTTAGAAAAA CTGATACGCT CAGTAAGCGA
GAAGAACAAT TAGCGCATAT TGAAGAAAAG AAACGACTGG AATTGGAGCG TATTTCAAAT
TTGAGCATGG ATGATGCTCG TGAAATTATC TTGAGTGAAA CCCGTGATGG TTTAACAAAA
GAGATGGCTC AAACAATTCG TCAAAGTGAA GAAAAAGCTC AAGCAGAAGC AGATAAAAGA
GCTAAAAATA TTATTTCACT TGCCATTCAA CGTGTTTCAT CTGATTCGGT AGCTGAACAA
ACTGTTTCAG TTGTCAATTT ACCAGATGAT GGCATGAAGG GTCGAATTAT CGGTCGTGAA
GGTCGTAATA TTCGTACTTT TGAAGCTTTG ACTGGAATTG ATGTCATCAT TGATGATACG
CCAGAAGCAG TTGTACTTTC AGGATTTGAT CCAATTCGTC GTGAAATTGC TCGAATGACA
CTTGAACAAT TAGTTCAAGA TGGTCGAATT CATCCAGCTC GCATTGAAGA GTTGGTTGAG
AAAAATCGTA AGGCCCTTGA TCACAAGATG CGTGAATATG GGGAACAAGC TGCATTTGAA
GTGGGCGCGC ATAATTTGCA TCCTGACTTG ATGAAGATTA TGGGACGTTT ACACTTCCGT
ACTTCTTATG GTCAAAATGT GCTTGACCAT TCTGTTGAAG TGGCTCATAT TGCTGGTAAT
TTAGCTGGTG AAATGGGAGA AAATGAGGCT CTTGCCAAAC GTGCAGGATT CTTGCATGAT
ATTGGTAAAG CACTTGACCA TGAGGTTGAG GGAAGCCACG TTGAGATTGG TACAGAACTT
GCACGTAAGT ACAAGGAAAA TCCAATTGTA ATCAACACAA TCGCTAGTCA CCATGGCGAT
ACAGAGCCAT TAAGTAACAT CGCAGTACTT GTTGCAGCAG CAGATGCATT GTCAGCAGCA
CGTCCTGGAG CTCGTCGTGA ATCAATTGAA AATTACATCA AACGTTTGAA AGACCTCGAA
GCAATTTCAA CAAGCTTTGA TGGTGTGGAA ACAGCCTTTG CTCTGCAAGC TGGACGTGAA
ATTCGAGTGA TGGTTAAACC AGATAAATTG ACGGATGACC AAATCGTAAT TTTGGCGCGT
GATGTGAAAA ATAGAATCGA AGATGAGATG GATTATCCCG GTAATATTAA AGTTACCGTT
ATCCGAGAAA CTCGAGCGAT TGACTACGCA AAATAA
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| Protein sequence | MDIISIVLLV LLVVLVVAFI FCAQNIKKNK QDAESLFNEA ENKANEVMAS AKREAESLKR
EAEAFKKEAR YTLREEEQKQ RREIEDEFKQ ERQELKETEK RLKQREEILD RKDDTLTKKE
ENLDSKEENL VRKTDTLSKR EEQLAHIEEK KRLELERISN LSMDDAREII LSETRDGLTK
EMAQTIRQSE EKAQAEADKR AKNIISLAIQ RVSSDSVAEQ TVSVVNLPDD GMKGRIIGRE
GRNIRTFEAL TGIDVIIDDT PEAVVLSGFD PIRREIARMT LEQLVQDGRI HPARIEELVE
KNRKALDHKM REYGEQAAFE VGAHNLHPDL MKIMGRLHFR TSYGQNVLDH SVEVAHIAGN
LAGEMGENEA LAKRAGFLHD IGKALDHEVE GSHVEIGTEL ARKYKENPIV INTIASHHGD
TEPLSNIAVL VAAADALSAA RPGARRESIE NYIKRLKDLE AISTSFDGVE TAFALQAGRE
IRVMVKPDKL TDDQIVILAR DVKNRIEDEM DYPGNIKVTV IRETRAIDYA K
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