Gene LACR_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2145 
Symbol 
ID4433980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp2014672 
End bp2015853 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content33% 
IMG OID639667835 
Productintegrase 
Protein accessionYP_811732 
Protein GI116512825 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.234907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTA AAGAAGTTCA AAAAAAAGAC GGTACAACCG TCTATAAAGT AAATGTCTAT 
CTTGGTGTAG ATAGCCTAAC AGGTAAGCAA GTACGCACCA CGGTTACAGC CAAGAACCGT
AAAACGTGCG AGAATAAAGC TCACCAAGCT ATGAATAAGT TTATCAAAAA TGGCTCTACT
GTTGCAAGAG AAAAAGTTTC ATTTGACAAT TTTAATGCCT TAGCCACTAG TTGGTTTGAT
TCTTATAAAT TGACAGTAAA AGCAAACACT ATCAGAATCA ATAGTAATTT TTTAAAAAAT
TATATTTTGC CAGCACTCGG AAACTATAAA GTTGAGAAAA TTACAACTGT ACTATTGCAA
AATATTGTTA ATGACTGGGC TAGAAATGCC AATACTGCTG AAATAGTTAA CGGTAATCGT
GAAAAGGGAA AAAGTAAAGA TTATAAATTG TTACTCAATA TCATCAAACG CATTCTTGAT
TATGGTATGC AATTAGGTGT TATCTCAGAC AATCCAGCTA TAAAAGTATT TTCTCCAAAA
CTCAAGACAA GAACAGTCAA AAAAATAAAG TATTTTAACA ATGATGAACT CAAACGCTTC
TTGGATTACC TTGACTCGTT ACAATCAACC ACAGCAAATA TAAAAAGCAC TTCTCTATAC
AAGCTTTTAC TTGCTACTGG TTTGCGTATC TGTGAGGCTT TAGCCTTATC ATGGTCTGAT
ATTGATTTTG TCAATAATAC CGTTAGTGTA TCTAAGACAC TCATACAATA TAGCAATGAG
ATACAAGACA GTGCAAAAAC AAAAGAAAGC AATCGTTTAG TTTCTGTAGA TAGCGAGACA
ATTTCAATGT TGAAAGAGTG GAGAAAACAC CAAAATTACG GCGCTATATC TTTGCATGAT
TCTCTAGTTT TCTCATATCA TCAAAAAATG AGAACTTACG AACTCGAAAG ACAGCACTTA
GTTCGACACT TTAAAAAAGC AAAAGTTCCT AACATAGGTT TTCATGGTTT CCGTCACACT
CACGCAAGCC TACTAATGAA CAATGATGTA AATCCTAAAG AAATTCAAAT GAGATTAGGA
CATGCAGACT ATTCGATCAC AATGAATTTG TACAGTCATC TTGCTAAAGA GAAAAAGAAA
GAAACTGCTG AAAAGTTCGC TAATATACTT AAAGCACTAT GA
 
Protein sequence
MNIKEVQKKD GTTVYKVNVY LGVDSLTGKQ VRTTVTAKNR KTCENKAHQA MNKFIKNGST 
VAREKVSFDN FNALATSWFD SYKLTVKANT IRINSNFLKN YILPALGNYK VEKITTVLLQ
NIVNDWARNA NTAEIVNGNR EKGKSKDYKL LLNIIKRILD YGMQLGVISD NPAIKVFSPK
LKTRTVKKIK YFNNDELKRF LDYLDSLQST TANIKSTSLY KLLLATGLRI CEALALSWSD
IDFVNNTVSV SKTLIQYSNE IQDSAKTKES NRLVSVDSET ISMLKEWRKH QNYGAISLHD
SLVFSYHQKM RTYELERQHL VRHFKKAKVP NIGFHGFRHT HASLLMNNDV NPKEIQMRLG
HADYSITMNL YSHLAKEKKK ETAEKFANIL KAL