| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2088 |
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| Symbol | |
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| ID | 4433693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1979811 |
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| End bp | 1980878 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639667781 |
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| Product | cell wall-associated hydrolase |
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| Protein accession | YP_811678 |
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| Protein GI | 116512771 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | [TIGR01592] holin, SPP1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.155991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA TTGATAAAGG AACACTCACA CGTACAATCT TACTTTGGTT GGCAATTTTA
AACCAAGTAT TGACAGCGCT TGGTAAGAAT CCACTTCCAT TAGATGATAA TACTGTCAGT
ACATTAATTA CTGCTGTATT TGCTCTTTGG GCTTGGTGGA AGAATAATGA CTTCACTCAT
GCAGCTAAAA AAGGAACTGA ACTTACAAAA AGTTTGAAAA ATGGTGATAG CGTTCAAGTG
GTTAAAGCTT CTGACGCTGA CCACGAATTC ACAGAAGGGG GGCGAATGAT GTCAAGTATT
GAAAATATGA TTGCTTGGAT GCAAGCACGA AAAGGCAAAG TTACTTACTC AATGACTTCA
CGAATGGGTC CAACAAGTTA TGATTGCAGC TCGTCAGTAT TCTTTGCCAT GATTGCTGGT
GGTTTTCTGT CAGTAGGTTC AATGGGAAAT ACTGAAACTT TATTTGGAAT GTCTGGCACA
AAACTCAAAG AAATCAGCCG TGGAGAAGTG CAACGTGGGG ACATTTTTAT CTCGGGCACT
CCAGGAGGTT CTGCTGGATC TGATGGACAC ACAGGTATTT TCCTAAGCAA TGGTTCATTC
ATTCACTGTT CTTACACTCA CAATAGAATT GCGATTGATA CGAACGATGC ATACATGAGT
ACACGCTTAC CACATCACTT TTATCGAATT GTTGGTTCAG GTTCAGCAAA TACTGATGAC
AAGCCACAAA TGGTTACTCT AAATCTTGAT GGTCAATTTG GAAATGCGAC CGCTAAACGA
TTGCAAGAAT ACTTTGATAC TGCTGGTAAA GACGGAGTAA TCAGTCACCA GTACAAACAA
ACCTTTAATC AAAATATTTA TGCTGCTCAG TTTGATTCAT CACTGACTGG TTCAAACGTG
GTTAAAGCAT TGCAAAGATT TTTAGGAATT GGACAAGACG GACTGTTTGG GCAAGCTACG
ATTAAAGCAC TACAAAAACA TCTTGGAACA ACACAAGACG GAATAATTAG CCCAGTATCT
GATTCTGTCA GAGAATTACA ACGTCGATTA AATGCGAATA AACTATAA
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| Protein sequence | MKTIDKGTLT RTILLWLAIL NQVLTALGKN PLPLDDNTVS TLITAVFALW AWWKNNDFTH
AAKKGTELTK SLKNGDSVQV VKASDADHEF TEGGRMMSSI ENMIAWMQAR KGKVTYSMTS
RMGPTSYDCS SSVFFAMIAG GFLSVGSMGN TETLFGMSGT KLKEISRGEV QRGDIFISGT
PGGSAGSDGH TGIFLSNGSF IHCSYTHNRI AIDTNDAYMS TRLPHHFYRI VGSGSANTDD
KPQMVTLNLD GQFGNATAKR LQEYFDTAGK DGVISHQYKQ TFNQNIYAAQ FDSSLTGSNV
VKALQRFLGI GQDGLFGQAT IKALQKHLGT TQDGIISPVS DSVRELQRRL NANKL
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