| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_2084 |
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| Symbol | |
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| ID | 4433689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1974915 |
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| End bp | 1976189 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639667777 |
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| Product | tRNA and rRNA cytosine-C5-methylase |
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| Protein accession | YP_811674 |
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| Protein GI | 116512767 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.616143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAAAAA ATGCAAGACA AACCGCACTC GATGTACTAA ATGATATTTT TGGTAATGAT
GCCTATGCAA ATATTTCATT GGATCGAAAT TTGCGAGATT CTGAACTATC CACAGTGGAT
AAAGGCTTTG TAACAGCCCT TGTCTACGGT GTAGTTTCTA AAAAAGCTTT ATTAGAGTGG
TACATTACTC CTTTATTAAA AAAAGAGCCT AAACCTTGGG CTAAAATGCT TTTATTACTC
ACAATTTATC AAGTCCTATT TATGGATAAG GTGCCTACTT CGGCAGCAGT TGATGAAGCT
GTAAAAATTG CTAAACGACA TGATGGACAA GCAACAGCTA ATTTTATTAA TGCTGTTTTA
AGAAACTTTA TGCGTTCTGA GCACAGAAAT GAAGAACCTA AAGATTGGGA AACTAAATAT
TCAATGCCAA AACTGTTATT GGATAAAATG GTTCGCCAAT TCGGTGGGAA AAGAACAGGA
GAAATCCTCG AAAGTCTTGA AAAACCAAGT CATGTGAGCT TAAGAAAAAT TGATCCAACT
GTAGAAATTG CTGGGACTCG TCCGTCTTTA CTGACAGAAA CAGCATTAAT TGCTGACAGC
GGAAATTTTT CAATTATAGA AGAGTTTCAA ACTGGAAGAA TTACGATTCA AGATGAAACA
AGTCAATTAG TTGCTCCTCA ACTTGAATTA GAAGGAACAG AAGAAGTTCT TGATGCCTGT
GCTGCCCCAG GTGGGAAAAG CACACATATG GCTCAATATT TGACAACTGG TCATATCACG
GCATTGGATT TATACGAGCA TAAACTTGAT TTAATTAATC AAAATGCACA ACGTCAGCAT
GTTGCGGATA AAATTACCAC TCAAAAAGCT GATGCGACAA TGATTTATGA GAATTTTGGT
CCAGAAAAAT TTGATCGAAT TCTAGTCGAT GCTCCATGTT CAGGAATTGG ATTAATTCGC
CGTAAACCAG ATATCCGTTA CCGGAAAGAA AGTTCGGATT TCATAGATTT ACAAAAAATT
CAATTAGAAA TTCTAAACAG CGCCTCGAAA AGCCTGAAAA AAAGTGGTAT AATGGTGTAC
AGTACTTGTA CAATTTTTGA TGAAGAAAAC TTTGACGTTG TTCATGAGTT CCTTGAAAAT
CATCCAAATT TTGAACAAGT TGAAATTTCA AATGAAAAAC CAGAAGTGAT TAAAGAGGGC
TGTCTTTTCA TTACCCCAGA AATGTATCAT ACGGATGGAT TCTTCATCGC GAAATTTAAA
AAAATAGGTG AATAA
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| Protein sequence | MTKNARQTAL DVLNDIFGND AYANISLDRN LRDSELSTVD KGFVTALVYG VVSKKALLEW
YITPLLKKEP KPWAKMLLLL TIYQVLFMDK VPTSAAVDEA VKIAKRHDGQ ATANFINAVL
RNFMRSEHRN EEPKDWETKY SMPKLLLDKM VRQFGGKRTG EILESLEKPS HVSLRKIDPT
VEIAGTRPSL LTETALIADS GNFSIIEEFQ TGRITIQDET SQLVAPQLEL EGTEEVLDAC
AAPGGKSTHM AQYLTTGHIT ALDLYEHKLD LINQNAQRQH VADKITTQKA DATMIYENFG
PEKFDRILVD APCSGIGLIR RKPDIRYRKE SSDFIDLQKI QLEILNSASK SLKKSGIMVY
STCTIFDEEN FDVVHEFLEN HPNFEQVEIS NEKPEVIKEG CLFITPEMYH TDGFFIAKFK
KIGE
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