Gene LACR_2039 details

Gene Information

• Locus tag: LACR_2039
• ID: 4433768
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: -
• Start bp: 1930694
• End bp: 1932571
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 639667735
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_811632
• Protein GI: 116512725
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTTC AAGAAAATTA TGATGTCATC GTCATCGGAG GAGGACATGC GGGTGTTGAA 
GCTTCGCTTG CGGCTGCACG CATGGGTTCT AAAACGTTAT TGATGACGAT TAATCTTAAC 
ATGGTTGCCT TTATGCCATG TAATCCATCA ATTGGTGGCT CAGCTAAAGG GATTGTTGTC 
AGAGAAATTG ATGCCCTAGG TGGGGAAATG GGACGCAATA TTGACAAGAC CTATATTCAA 
ATGAAGATGC TTAATACAGG GAAAGGTCCA GCAGTTCGTG CCCTCCGTGC CCAAGCAGAT 
AAAGATGAAT ATGCTGCTTC AATGAAAAAT ACAGTTTCTG ACCAAGAAAA CTTGACGCTT 
CGTCAGGGAA TGGTTGAAGA ACTCATCCTT GATGATGAAA AGCAAAAAGT TATTGGTGTT 
CGGACATCAA CAGGAACACA ATACGGGGCT AAGGCTGTCA TCATCACGAC TGGAACAGCT 
TTACGTGGGG AAATTATCAT CGGTGAATTG AAGTATTCTT CTGGACCAAA TAATTCTCTT 
TCATCAATTG GTTTAGCAGA TAATTTACAT GAAATTGGTT TTGAAATTGG TCGTTTTAAA 
ACTGGAACAC CGCCACGAGT TTTGGCAAGT TCAATTGATT ATGATAAAAC AGAAATCCAA 
CCAGGAGATG AAGCACCAAA TCATTTTAGC TTTATGAGCT CTGACGAGGA TTATCTAAAA 
GACCAAATTC CTTGCTGGTT GACCTATACT ACAGAAAATA GTCATACGAT TTTGCGTGAT 
AATTTGCACC GTGCACCACT TTTTTCTGGT ATTGTTAAAG GAGTAGGTCC GCGCTATTGC 
CCATCCATAG AAGACAAAAT TACTCGTTTT GCTGACAAAC CTCGTCATCA ACTCTTTCTT 
GAACCAGAAG GACGCAATAC AGAAGAAGTT TATATCGGTG GACTTTCAAC TTCAATGCCT 
GAAGATGTTC AATTTGATTT AGTAAAATCA ATTCCAGGAC TCGAGAATGC TAAGATGATG 
CGTCCAGGTT ATGCCATAGA ATATGATGTG GTGATGCCTC ATCAACTCCG TCCTACTCTT 
GAAACGAAAT TGATTTCAGG TCTATTTACA GCCGGACAAA CAAATGGAAC TTCAGGTTAT 
GAAGAAGCGG CTGGCCAAGG TTTGGTTGCC GGAATAAATG CCGCTCTTAA GATTCAAGGA 
AAACCAGAAT TTATTCTTAA ACGCAGCGAA GCTTATATCG GTGTAATGAT TGATGATTTG 
GTAACCAAAG GGACTTTAGA ACCTTATCGC CTCTTGACTT CACGGGCTGA GTACCGTTTG 
ATACTCCGTC ATGATAATGC TGACCGCCGC TTGACAGAAA TTGGACGTCA AGTTGGTCTC 
GTTTCAGATG CACAATGGGA GCATTACCAA GCTAAAATGG CTCAATTTGA CCGAGAAATG 
AAACGACTCA ATTCGGAAAA ACTCAAACCT TTGCCTGATA CTCAAGAAAA ATTAGGAAAA 
TTGGGCTTTG GTCCAATCAA AGATGCACTG ACAGGTGCCG AATTTTTGAA ACGACCAGAA 
GTTCATTATG ATGAAGTGAT TGATTTCATT GGACAAGCAC CAGAAGTAAT TGACCGCACA 
GTCATTGAAT TGATTGAAAC TGAAATTACT TACGAAGGTT ATATTAAAAA AGCAATGGAC 
CAAGTGGACA AAATGCATCG CTTGGAAGCA AAACGAATTC CTAAAAATAT GGATTGGGAT 
AAGTTAGATT CCATCGCTAC CGAGGCTCGT CAAAAATTCA AAAAAATAAA TCCAGAAACA 
CTCGGACAAG CCAGCCGAAT TTCAGGTGTA AATCCTGCTG ATATTAGTAT TCTCATGGTT 
TATCTTGAAG GAAAATAA 

 

Protein sequence

MNFQENYDVI VIGGGHAGVE ASLAAARMGS KTLLMTINLN MVAFMPCNPS IGGSAKGIVV 
REIDALGGEM GRNIDKTYIQ MKMLNTGKGP AVRALRAQAD KDEYAASMKN TVSDQENLTL 
RQGMVEELIL DDEKQKVIGV RTSTGTQYGA KAVIITTGTA LRGEIIIGEL KYSSGPNNSL 
SSIGLADNLH EIGFEIGRFK TGTPPRVLAS SIDYDKTEIQ PGDEAPNHFS FMSSDEDYLK 
DQIPCWLTYT TENSHTILRD NLHRAPLFSG IVKGVGPRYC PSIEDKITRF ADKPRHQLFL 
EPEGRNTEEV YIGGLSTSMP EDVQFDLVKS IPGLENAKMM RPGYAIEYDV VMPHQLRPTL 
ETKLISGLFT AGQTNGTSGY EEAAGQGLVA GINAALKIQG KPEFILKRSE AYIGVMIDDL 
VTKGTLEPYR LLTSRAEYRL ILRHDNADRR LTEIGRQVGL VSDAQWEHYQ AKMAQFDREM 
KRLNSEKLKP LPDTQEKLGK LGFGPIKDAL TGAEFLKRPE VHYDEVIDFI GQAPEVIDRT 
VIELIETEIT YEGYIKKAMD QVDKMHRLEA KRIPKNMDWD KLDSIATEAR QKFKKINPET 
LGQASRISGV NPADISILMV YLEGK