Gene LACR_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2014 
Symbol 
ID4432842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp1910404 
End bp1911039 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content35% 
IMG OID639667711 
Productthiamine pyrophosphokinase 
Protein accessionYP_811608 
Protein GI116512701 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1564] Thiamine pyrophosphokinase 
TIGRFAM ID[TIGR01378] thiamine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT TAATTGTAGC AGGCTTGCCT GATTTTATTC CCGACGAAAC TTTTGATAAA 
TATATTGGAG TGGATCGTGG CTCGCTTTTT TTAGTGGAAA AAGGGATTCA GTTAACGCTT 
GCGATTGGTG ATTTTGATTC TGTCAGTAAA ACTGAACTTG ATAAAATTTC TGTCAGTACT 
GACAAGTTGA TTAAATTACC TGCTGAAAAA GATTTGACAG ATTTAGAAGC AGCTTTAGAT 
TTTATATTAA AAGATTTTCC AGATGCTGAT CTGATAATAG CTGGTGCTTT AGGCGGACGT 
TTGGATCACT TACTGACCAA TGCCTACCTA GCAACACGCC CAAAATATCA AAGTCTTGCT 
CCCAAAATAT ATTTAGTTGA CCAACAAAAT TTGGTGACCT ATTTACTACC AGGTCAGCAT 
TTACTCAAAA GAATACCAAC TTACAAATAT ATTGGTTTTG TACAGGTCGA TACAAAAGAT 
AGTCTGGCTA TTGTGGGAGC CAAGTATCCT TTGAAAGCCG AAGATAATTT TAGTTTAATC 
TATGCAAGTA ATGAGTTTAT AAGTGAGCAG ATGCAAGTTT CATTTGAAAG TGGCGTGGTT 
ATTGTGATTT ATTCAGGAGA TTTGCGGAAA AAATAA
 
Protein sequence
MKILIVAGLP DFIPDETFDK YIGVDRGSLF LVEKGIQLTL AIGDFDSVSK TELDKISVST 
DKLIKLPAEK DLTDLEAALD FILKDFPDAD LIIAGALGGR LDHLLTNAYL ATRPKYQSLA 
PKIYLVDQQN LVTYLLPGQH LLKRIPTYKY IGFVQVDTKD SLAIVGAKYP LKAEDNFSLI 
YASNEFISEQ MQVSFESGVV IVIYSGDLRK K