| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1980 |
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| Symbol | |
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| ID | 4432638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1868767 |
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| End bp | 1872390 |
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| Gene Length | 3624 bp |
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| Protein Length | 1207 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639667678 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_811575 |
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| Protein GI | 116512668 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTGATG TAAATAAATT TGAGAGTATG CGTATTGGTA TCGCATCTCC ACAAAAAATT
CGTTACTGGT CATTCGGTGA AGTAAAAAAA CCAGAAACAA TTAACTATCG TACACAAAAA
CCTGAACGTG AAGGACTCTT TGACGAACGT ATTTTCGGTC CTCAAAAAGA CTGGGAATGT
GCTTGTGGAA AACTTAAAGG TGTTTTCTAT AAGAATCAAG TCTGTGAACT TTGTGGTGTT
CAAGTAACAA CTGCAAAATC ACGTCGTGAA CGTATGGGAC ATATTGAGCT TGCTGCTCCA
ATTTCACATA TTTGGTATTT CAAGGGAATT CCATCACGTA TGGGACTCGC TCTGGATATG
AGCCCGCGTG CACTTGAAGA AGTAATTTAC TTCGCAAGTT ATGTGGTAAT TGATCCAAAA
GAAACTGATC TTGAGAAAAA ACAACTCTTG ACTGAGCGTG AATATCGTGA ACAACTTTTG
AAAAATGGTT TTGGTTCATT CGTTGCAAAA ATGGGTGCTG AAGCAATTCA AGATTTGTTG
AATGATGTTG ATATTGACAA AGAAGTTGCT GAACTCAAAG AAGAACTCAA AACAGTGACT
GGACAACGTC GTGTAAAAAT TATTCGTCGT TTAGATGTTT TGTCAGCTTT CAGAAAATCA
GGAAATGCTT TATCTTGGAT GGTCTTAAAC GTATTACCAG TTATTCCACC AGATTTGCGT
CCAATGGTTC AATTAGATGG TGGACGTTTT GCCACATCTG ACTTGAATGA CTTGTATCGT
CGTGTTATCA ACCGTAATAA CCGTTTGAAA CGTTTGATGG AACTTAATGC TCCAAATATT
ATCGTTCAAA ATGAAAAACG GATGCTCCAA GAAGCTGTTG ATACTTTGAT TGACAATGGT
CGTCGTGGTC GTCCAATCAC TGGTGCTGGT AACCGTCCAT TGAAATCTCT TTCACACATG
TTGAAAGGGA AACAAGGACG TTTCCGTCAA AACTTGCTTG GTAAACGTGT TGACTATTCT
GGACGTTCAG TTATCGCTGT CGGTCCAACA CTTAAAATGT ACCAATGTGG TGTTCCACGT
GAAATGGCGA TTGAGTTGTT CAAACCATTT GTAATGGCAC AACTTGTTAA AAAAGAATTG
GCTGCTAATA TTCGTGCGGC TAAACGTAAA GTTGAACGTC AAGATTCAGA CGTTTGGGAT
GTACTTGAAA CGGTTGTTAA AGAACACCCT GTTCTCCTTA ACCGCGCACC TACGCTTCAC
CGTTTGGGGA TTCAAGCTTT TGAACCAGTC TTAATTGATG GTAAAGCCAT CCGTCTTCAC
CCACTTGCTT GTGAAGCCTA TAACGCCGAC TTTGACGGTG ACCAAATGGC CATTCACTTG
CCATTGTCTG AAGAAGCACA AGCTGAAGCA CGTCTTTTGA TGCTTGCTGC TGAACATATC
TTGAACCCTA AAGATGGTAA ACCAGTTGTT ACACCATCAC AAGATATGGT CCTTGGTAAC
TACTACCTTA CAATGGAAGA AAAAGGTCGT GAAGGCGAAG GAATGATTTT TGCAACTCCT
GAAGAAGTTG AAATCGCAAT GCGTAACGGT TATGTACACT TGCATACACG TATCGGTATC
GCGACAAAAT CACTCAATAA GCCTTGGACT GAAAATCAAC AAGATAAAAT CTTGGTAACC
ACTGTTGGTA AAGTTATTTT CAACTCAATC ATTCCAGAAG GAATGCCTTA CTTGAATGAA
CCAACTGATG TTAACTTGAC AACTTCAACT GATGACCGTT TCTTTATGGA TGCTGGTCAA
AACATCAAAG AAGTTTTGGC TGGAATCGAT ACTGTTCGTC CATTCAAAAA AGGATATCTT
GGAAATATTA TCGCCGAAGT ATTCAAACGT TACCGTACAA CAGCTACATC TGAGTACCTT
GACCGTTTGA AAGACCTTGG TTACTACCAA TCTACTTTGG CTGGTTTGAC TGTGGGTATC
GCTGATATTC CTGTTGTTGA AGATAAACAT GAAATCATTG ATGCTGCGCA TAAACGCGTA
GAACAAATCA CTAAACAATT CCGTCGCGGT TTGATTACTG ATGATGAACG TTATAATGCC
GTTACTGGTG TTTGGCGTGA TGCAAAAGAG TCTCTCGAAA AACGATTGAT TGAAGAACAA
GATTTGACAA ACCCAATCGT TATGATGATG GATTCTGGAG CCCGTGGTAA TATTTCCAAC
TTCTCTCAAC TTGCTGGTAT GCGTGGATTG ATGGCTGCTC CTAATGGTAA AATCATGGAA
TTGCCTATCA TCTCTAACTT CCGTGAAGGA CTTTCTGTCT TGGAAATGTT CTTCTCAACT
CACGGTGCTC GTAAAGGGAT GACCGATACG GCCCTTAAGA CAGCCGACTC AGGTTACCTT
ACTCGTCGTT TGGTTGACGT TGCTCAAGAT GTTATCATTC GTGAAGATGA CTGTGGTACT
GACCGCGGAC TTGTGATTGC TGATATTGCA ACTGGTAAAG AAATGGTTGA ACCACTCTTT
GAACGTTTGG TTGGTCGTTA CACTCGTAAA TCAGTCCTTC ATCCAGAAAC TGGTGAAATG
ATTATTGGCG ATGATACTTT GATTTCTGAA GATATTGCTC GTAAAATCAT TGAAGCTGGC
GTTAAAGAAG TAACAATCCG TTCAGTATTT ACATGTAAAA CACCACATGG TGTATGTAAA
CATTGTTATG GTATCAACTT GGCAACAGGT GATGCTGTTG AAGTTGGTGA AGCTGTTGGT
ACAATCGCCG CTCAATCTAT CGGTGAACCT GGTACTCAGT TGACAATGCG TACATTCCAC
ACGGGTGGTG TTGCGTCAAG TTCAGATATT ACTCAAGGTT TGCCTCGTGT CCAAGAAATC
TTTGAAGCAC GTAACCCTAA AGGGGAAGCA ATCATCACTG AAGTAACTGG TACAGTTGAA
TCAATCGTTG AAGATGGCGC AACTCGTACT CGTGAAATTA CTGTAAAAGG TAAAACAGAT
ACTCGTAGCT ACACTGTAGG TATGGCTGAT GTCTTGATGG TTGAAGAAGG CGAATTTATC
CACCGTGGTG CGCCTTTGAT TCAAGGTTCT ATTGAACCTA AACATTTGCT TCAAGTTCGT
GATGCTTTGT CAGTGGAAAC TTACTTGCTC GGTGAAGTTC AAAAAACTTA CCGTTCACAA
GGGGTTGAAA TTGGTGACAA GCACATCGAG GTAATGGTTC GCCAAATGCT TCGTAAAGTT
CGTATCATGG ACAATGGTTC AATTGATGTG CTTCCAGGTA CTTTGATGGA CATTTCTGAT
TTTGAAGCTT TGAATGAAAC TGCACTCTTG AATGGTGAAA TGCCTGCAAC TGGTCGTCCA
GTCTTGATGG GTATTACTAA AGCCTCTCTT GAAACAAATT CATTCTTGTC AGCTGCGTCA
TTCCAAGAAA CAACTCGTGT CCTTACTGAT GCCGCAATTC GTGGTAAAGA AGACCATTTG
CTTGGTTTGA AAGAAAATGT TATTATCGGT AAGATTATTC CTGCTGGTAC AGGTATGTTC
CGTTACCGTA ACATCGAACC TTTAGCTGAT TTGACAAATG CTCCAGAAGT AAAAGAAGTT
GAAACAGAAA CTGTGGAAAA CTAG
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| Protein sequence | MVDVNKFESM RIGIASPQKI RYWSFGEVKK PETINYRTQK PEREGLFDER IFGPQKDWEC
ACGKLKGVFY KNQVCELCGV QVTTAKSRRE RMGHIELAAP ISHIWYFKGI PSRMGLALDM
SPRALEEVIY FASYVVIDPK ETDLEKKQLL TEREYREQLL KNGFGSFVAK MGAEAIQDLL
NDVDIDKEVA ELKEELKTVT GQRRVKIIRR LDVLSAFRKS GNALSWMVLN VLPVIPPDLR
PMVQLDGGRF ATSDLNDLYR RVINRNNRLK RLMELNAPNI IVQNEKRMLQ EAVDTLIDNG
RRGRPITGAG NRPLKSLSHM LKGKQGRFRQ NLLGKRVDYS GRSVIAVGPT LKMYQCGVPR
EMAIELFKPF VMAQLVKKEL AANIRAAKRK VERQDSDVWD VLETVVKEHP VLLNRAPTLH
RLGIQAFEPV LIDGKAIRLH PLACEAYNAD FDGDQMAIHL PLSEEAQAEA RLLMLAAEHI
LNPKDGKPVV TPSQDMVLGN YYLTMEEKGR EGEGMIFATP EEVEIAMRNG YVHLHTRIGI
ATKSLNKPWT ENQQDKILVT TVGKVIFNSI IPEGMPYLNE PTDVNLTTST DDRFFMDAGQ
NIKEVLAGID TVRPFKKGYL GNIIAEVFKR YRTTATSEYL DRLKDLGYYQ STLAGLTVGI
ADIPVVEDKH EIIDAAHKRV EQITKQFRRG LITDDERYNA VTGVWRDAKE SLEKRLIEEQ
DLTNPIVMMM DSGARGNISN FSQLAGMRGL MAAPNGKIME LPIISNFREG LSVLEMFFST
HGARKGMTDT ALKTADSGYL TRRLVDVAQD VIIREDDCGT DRGLVIADIA TGKEMVEPLF
ERLVGRYTRK SVLHPETGEM IIGDDTLISE DIARKIIEAG VKEVTIRSVF TCKTPHGVCK
HCYGINLATG DAVEVGEAVG TIAAQSIGEP GTQLTMRTFH TGGVASSSDI TQGLPRVQEI
FEARNPKGEA IITEVTGTVE SIVEDGATRT REITVKGKTD TRSYTVGMAD VLMVEEGEFI
HRGAPLIQGS IEPKHLLQVR DALSVETYLL GEVQKTYRSQ GVEIGDKHIE VMVRQMLRKV
RIMDNGSIDV LPGTLMDISD FEALNETALL NGEMPATGRP VLMGITKASL ETNSFLSAAS
FQETTRVLTD AAIRGKEDHL LGLKENVIIG KIIPAGTGMF RYRNIEPLAD LTNAPEVKEV
ETETVEN
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