Gene LACR_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1950 
Symbol 
ID4432156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp1842671 
End bp1843327 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content35% 
IMG OID639667649 
Producttranscriptional regulator 
Protein accessionYP_811546 
Protein GI116512639 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000196372 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATTTA CTGAATTAGC AAGAGAAAAG TCAGCAAAAT ATTGGGAAAT GAGTTTTGAA 
CACCCTTTTA TCGAAGGTTT AGTGACGGGG AACTTATCTT CTGATGTTTT CCGATATTAC 
TTACTTCAAG ATCGCTATTA TTTAGAGCAC TTTAGTAAGC TCTATCTTTA TATTGCGGAA 
AAAACTGAGG ATAAAATGAT TCGAGAACAT TTAAAATTAA ATGCAGAAGA ATTAAAAGAA 
GGTGAAATAT TCATTCGAGA AGGTTTTTTT AGGGACTTAG ACATTACCGA GCAAGAAATT 
TTAGAAACCG CTATTGCTCC AACTGCTTAT CATTATGTTT CTCATATGTA TCGTCAGCTC 
GTTGATGGTA CGGTTAATAC GGTTATTGCT GGAATATTGC CTTGCGCTTG GCTTTATCAT 
GAGATTGGAC TTCGTTTGAT TGATAGGGGT TCTTCTAACG CCTTATACCA ACGATGGATT 
GAAACATACG CGAGTGAAGA GGCTGCGGCA CAAATCGAAA AAGAGTGTGC CATTATCAAT 
CAACTTTATC AAGAAAGTAA TGAGTCAGAA CGTGAAAAAA TGCTTGAAGC TTTTGTGATT 
AGCAGTAAGA TGGAATACGA ATTTTGGGAA ATGTCGATGA ACTTAGAAAA ATGGTAA
 
Protein sequence
MLFTELAREK SAKYWEMSFE HPFIEGLVTG NLSSDVFRYY LLQDRYYLEH FSKLYLYIAE 
KTEDKMIREH LKLNAEELKE GEIFIREGFF RDLDITEQEI LETAIAPTAY HYVSHMYRQL 
VDGTVNTVIA GILPCAWLYH EIGLRLIDRG SSNALYQRWI ETYASEEAAA QIEKECAIIN 
QLYQESNESE REKMLEAFVI SSKMEYEFWE MSMNLEKW