| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1923 |
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| Symbol | |
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| ID | 4433897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 1818958 |
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| End bp | 1821102 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639667623 |
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| Product | amino acid ABC transporter permease/periplasmic protein |
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| Protein accession | YP_811520 |
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| Protein GI | 116512613 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.132292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAT TATTTTTCGC TCTGGCACTC ATGTTTGCCA CTGTTACAGC TTTCCTAGTA
GCGCCTTCGG TCAAGGCCGA GACGACTGTC AAAATCGCGT CTGATAGCTC TTATGCACCA
TTTGAATTTC AAAATGGTCA GAAAAAATGG GTAGGCATCG ACGTTGATAT TATGCAAGAA
GTTGCAAAAA TCAATGATTG GAAATTAGAA ATGTCTTACC CAGGTTTTGA TGCTGCACTT
CAAAATCTCA AAGCTGGACA AGTAGACGGT GTAATTGCTG GAATGACAAT CACCGATGAA
CGTAAAGACA CTTTTGATTT TTCTAATCCT TACTATACAT CTGCACTAAC TATTGCGACT
ACCAAAGATT CTAAGCTTAC TGATTATAGT GAACTTAAAG GAAAAGCAGT TGGAGCAAAA
AACGGAACTG CCGCTCAAAC TTGGCTTCAA GAAAATCAAA AGAAATATGG CTATAACATC
AAAACCTATT CTGATGGTGT TCATATGTTT GCCACACTTA GTTCAGGAAA CATCGTAGGA
GCAATGGATG AAGTTCCAGT TATCTCTTAT GCTATGAAAC AAGGTCAAGA TTTAGCTACA
AACTTCCCTT CTATCTCTCT TTCAGGAGGT TATGGTTTTG CTGTGATGAA AGGCAAAAAC
CAAACGCTCG TGGATGGTTT CAATAAAGCA TTGACTGAAA TGAAATCAAA TGGTGATTAT
GATAAAATCC TGAAAAAATA TGGAATAACA ACTTCTAAAA AAGCAACACC GAAAAAAGAT
GTTTATACCA TTGCCTCAGA TAATAGCTTT GCCCCTTTTG AATTTCAAAA TGACAACAAA
CAATTCACTG GTATCGACGT TGACTTACTA AATGCCATCG CCAAGAACCA AGGATTCAAA
CTCAAATGGA ATTTCATTGG TTTCCAAGCA GCTGTTGACT CTGTTCAATC TGGTCATGCT
GACGGAATGA TGTCAGGGAT GTCAATTACC GATGCCCGTA AACAAGTTTT TGATTATGGT
AATCCTTACT ATTCATCTAA CTTAACCATT GCTACATCAA GTACCGATGA TTCTATCAAA
TCATGGAAAG ACCTAAAAGG TAAAACACTT GGGGCTAAAA ACGGTACTGC CTCTTTCGAT
TATCTTAATG ATCACGCAAA AGAATACGGT TATACTGTAA AAACATTTAC TGATGCAACA
ACCATGTATT CATCATTAAA TAACGGCTCT ATCAATGCTT TAATGGACGA TGAACCTGTC
ATCAAATATG CCATTAAACA AGGACAAAAA TTTACTACAC CAATTAAACC AATCCCTGAC
GGTCAATATG GATTTGCCGT TAAAAAAGGA AGCAATCCTG AACTGATTGA AATGTTTAAT
AATGGTTTAG CTAATCTCCG TGCAAATGGT GAATATGATA AAATCATTGA TAAATATTTA
GCTAGTGATG CTAAAACCAT TCAATCAAGT GCAAAAGAAA ATACTTTCTT TGGTATTTTG
CAAAACAACT GGGAACAAAT CGGACGCGGG TTGCTCGTTA CACTTGAACT TGCTGTTCTC
TCATTTATCC TAGCAATGAT TGTCGGAATT ATCTTTGGAC TCTTCTCTGT AGCTCCAAGC
AAGATTCTTC GTACAATTGC ACGAATTTAT GTCGACCTTA ACCGTTCAAT TCCGCTTTTA
GTGTTAACAA TCTTTATCTT CTACGGAATT CCTAACCTTC TACAAATCAT TACTGGTCAT
CAATCTCCAC TCAATGAATT TACGGCCGGT GTGATTGCCC TTACCTTAAA CTCTTCTGCT
TATATCGCAG AAATCGTTCG TTCTGGTGTC CAAGCAGTCC CTTCTGGACA AATGGAAGCC
AGCCGTTCAC TTGGTGTGAC ATACCTAACT TCAATGCGTA AGGTTATCTT GCCTCAAGCC
ATTAAAATCA CAATTCCTAG CTTGATTAAC CAATTCATCA TCACTTTGAA AGATACCACA
TTAGTTTCAG TTATCGGACT TGTTGAATTA CTCCAAACAG GTCAAATCAT CGTGGCCCGT
AACTTCCAAG CCTTCCGTGT TTATGGATTA ATTGGCTTAG TTTACATGAT TGTCCTCCTC
TTCTTGATGT GGGTTGGACG TCGAGTAGAA AAAAGAATGA AATAA
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| Protein sequence | MKKLFFALAL MFATVTAFLV APSVKAETTV KIASDSSYAP FEFQNGQKKW VGIDVDIMQE
VAKINDWKLE MSYPGFDAAL QNLKAGQVDG VIAGMTITDE RKDTFDFSNP YYTSALTIAT
TKDSKLTDYS ELKGKAVGAK NGTAAQTWLQ ENQKKYGYNI KTYSDGVHMF ATLSSGNIVG
AMDEVPVISY AMKQGQDLAT NFPSISLSGG YGFAVMKGKN QTLVDGFNKA LTEMKSNGDY
DKILKKYGIT TSKKATPKKD VYTIASDNSF APFEFQNDNK QFTGIDVDLL NAIAKNQGFK
LKWNFIGFQA AVDSVQSGHA DGMMSGMSIT DARKQVFDYG NPYYSSNLTI ATSSTDDSIK
SWKDLKGKTL GAKNGTASFD YLNDHAKEYG YTVKTFTDAT TMYSSLNNGS INALMDDEPV
IKYAIKQGQK FTTPIKPIPD GQYGFAVKKG SNPELIEMFN NGLANLRANG EYDKIIDKYL
ASDAKTIQSS AKENTFFGIL QNNWEQIGRG LLVTLELAVL SFILAMIVGI IFGLFSVAPS
KILRTIARIY VDLNRSIPLL VLTIFIFYGI PNLLQIITGH QSPLNEFTAG VIALTLNSSA
YIAEIVRSGV QAVPSGQMEA SRSLGVTYLT SMRKVILPQA IKITIPSLIN QFIITLKDTT
LVSVIGLVEL LQTGQIIVAR NFQAFRVYGL IGLVYMIVLL FLMWVGRRVE KRMK
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