Gene LACR_1921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1921 
SymbolaroE 
ID4433895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1816896 
End bp1817756 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content39% 
IMG OID639667621 
Productshikimate 5-dehydrogenase 
Protein accessionYP_811518 
Protein GI116512611 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000576763 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG ACGGTTACAC GCGGATGGCT GCTGTGGTGG CAAACCCTAT TAAACACAGC 
TTATCTCCTT TTATTCATAA TTTGGCCTTT GATTTAACTG ATGAAAATGG CGTTTATTTA
GCTTGGGAAG TTGAGTCCAA AAAATTAGCG GCTATTGTTG AAAATGTTCG TAATTTGGAC
ATGTATGGTC TGAATATCTC TATGCCTTAT AAAGGTGAAA TTATTAAATT TATGGATGAA
TTGAGCCCAG CGGCCGAACT AATCGGAGCG GTCAATACGG TAGTTAATCA TTCAGGAAAA
ATAATCGGAC ATAATACTGA TGGAATCGGA TTTTTCAACA GTTTAAAAAA ATATGATTTT
AAGATAGAAA ATAAACAAAT GCTTGTTCTT GGCGGCGGTG GAGCAGCGAT TGCCCTTATT
GCTCAAGCAG CTTTATCAGG AGCTAAAAAA ATAGTAGTGG CGGCGAGAAA ATCTGCTTCT
TATGACCCTT TAAATGAAAA ACTGGCAAAG CTGTCAGCAA AAACAGGAGT AGAAATTTTC
CTGACAGACT TATCTGGAGC TGATAGATTG CAAAAAGAGT TAAATCAGAC AGATTTATTA
GTGAATGCAA CTTCTGTCGG AATGGACGGA GCGTCTTTTC CTCTAGAAAA AAGCTTGCTT
CTTCCTGACA GACTCTTGGT GGTGGATGCT ATTTATAAAG TAAGAGAAAC ACCATTTTTA
CGCTGGGCCA AAGAGCAAGG AGCTCAAACT GAAAATGGGC TCGGTATGCT CATTGGACAG
GCGGCGGAAA GCTTTTATTT ATGGACAGGC AAAGAAATGC CTGTGGACAA AATTACATTA
GAAATGGAGA GAGAAGTATG A
 
Protein sequence
MKIDGYTRMA AVVANPIKHS LSPFIHNLAF DLTDENGVYL AWEVESKKLA AIVENVRNLD 
MYGLNISMPY KGEIIKFMDE LSPAAELIGA VNTVVNHSGK IIGHNTDGIG FFNSLKKYDF
KIENKQMLVL GGGGAAIALI AQAALSGAKK IVVAARKSAS YDPLNEKLAK LSAKTGVEIF
LTDLSGADRL QKELNQTDLL VNATSVGMDG ASFPLEKSLL LPDRLLVVDA IYKVRETPFL
RWAKEQGAQT ENGLGMLIGQ AAESFYLWTG KEMPVDKITL EMEREV