Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1903 |
Symbol | |
ID | 4432230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1798855 |
End bp | 1801356 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639667603 |
Product | ATP-dependent RecD/TraA family DNA helicase |
Protein accession | YP_811500 |
Protein GI | 116512593 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGATA AAACTTATGT TACAGGCTCA ATTGAAGCTA TTTTTTTCTA TAATCCAAGC AATTTTTATA AAGTTTTATT AATTGAGATT GATGAAACAA ATGCTGAATA TGATGATTTT GAAATTGTGG TCAATGGGAC AATTGGCGAT GTGGTCGAAG GGGATTCTTA TACTTTTTAT GGGCAATTAA CCCAGCATCC AAAGTATGGG GAACAATTGC AAGTCAGTCA ATATGAAAAG GCTGTACCAA CGTCTGGTGC TGGTTTGGTC AAGTATTTTT CATCAGATAA ATTTCCAGGG ATTGGTAAAA AAACGGCAGA GAAAATTGTT GAAACTTTTC CTGAAAATAC GGTAGATTCT ATTTTAGAAG CGCCTGAGAA ATTGGATGGT TTATTAACTC TAGCCAGAAA AAATTCATTT ATCAAACGTT TGCGTGAAAA TCATGGTATG GAAAAAGTGC TGACCAAGCT TGCGGAGTAT GGCTTGCCAA GTAAACTCAC TTTTCAAATT TATGAGTTGT ACAAAGAGGA AACGATTGAA AAAATTGAGG AAAATCCTTA TCAACTTGTG GAAGAAGTTA AAGGGGTGGG CTTTAAAACT GCCGATAAAA TTGCGAGTGA ACTAGGGATT GAAGCGGATA GTCCAAATCG TTTTCGAGCG GCTTTGATGC ATGAGGTCAA TACGCATTCG CAAGCAACGG GTGACACTTA TATTGAAGCT AAAAACTTGC TGGAATTGAC GATTGATTTA CTTGAAGAAG CCAGAAATAT TGAGGTCAAT CCAGCTGAAG TTGCTGCGGA AATAAATGGT TTAATTGTTG ATGGAAAAGT ACAGCAAGAA GGAACGAAAA TATTTGAAAA TTCCTTGTTT TTTGCTGAAG ACGGTATCCG AAAATCACTG ACAGCCTTAA CTAATCGTTT GGGAAAAGAT TTTGCTGACG AAAAGTTACT GACAGTTTTG GAAGAGGTAG AAAAAGATTT AGAGATTACT TATGATGAAC TTCAGAAACA GGCCATCATT GGAGCGATGA ATCAGCAATT TTTCATTTTG ACTGGGGGAC CAGGAACGGG GAAAACAACG ATTATTAATG GTTTCATTGA AACTTATGCC CGTCTTTATC AGTTAGATTT AGACCCTGAC CATTATAATG ATGACGTTTT TCCTATTTTA TTGGCGGCAC CGACTGGTCG CGCTTCAAGA CGGATGAATG AGTTGACTGG ACTTCCAGCA GCAACAATTC ATCGGCACTT AGGCTTAGGG CAAGATGAGG CAGAAGATGC GCTTGGTAAT GAGTTGTCAG GTTCACTTTT GATTGTCGAT GAATTTTCAA TGGTTGATAC TTGGCTAGCC AACAAACTTT TTCAAGCCAT TCCTGGTTCA ATGAAAGTCC TTCTCGTTGG CGATGCTGAC CAACTTCCTT CTGTGGGCCC TGGACAAATT TTTGCAGATT TATTAAAAAT TCCAGAAATT CCGTCAGTAA AATTGGATAA GATTTTTCGT CAGGGAGATG ATTCAACGAT TACCGATTTG GCTCATCATA TCAAAGATGG ACAATTACCT GCAGATTTTA CGGTGAAAAA AACTGACCGT TCTTATTTTG AAGTGAGTGC TAATTTTGTA CCACAAACGG TGGAGCAAAT TGCTAGTGCT TGGCAAAAAA GAGGAAATAA TCCTTTTGAA TTACAAATTT TAGCGCCCAT GTATAAAGGG GCCGCTGGGA TTAATGCAAT GAATATTCTC TTGCAAAATC TCTTTAATCC GCTTAATGAC CGGCTTGAAT TTGTTTTGGG TGATATGAAA TTTCGTGAAG GAGATAAAGT ATTACATTTA GTCAATGACG CTGAGGCCAA TGTATTCAAT GGAGATTTAG GACAAATTGT TGAATTGATT GCAGCAAAAT ATACTGACAG TAAACAAGAT GAGATTGTGA TGGATTTTGA TGGTCAAGAA TTGACCTATC CCAGATCTGA ATGGTATAAA ATTACGCTTG CTTATGCCAT GTCTATCCAT AAATCCCAAG GTTCGGAATT TTCAACGGTC ATCGTCCCGA TGGTCTCTTC TTATTCACGG ATGTTAGAGC GAAATTTACT CTATACAGCA ATCACGAGGG CAAAGCAAAG CTTAATTTTA TTGGGTGAAG AGCGTGCCTT TGCTCAGGCT GTGGCGCGTG AAGGAGCCAA TCGAAAAACT TTTCTTGTTG AGCGTTTTAA GGATGATAAG CCTGCAGCTG AAAATCTGTC AGTAGATTCC TTAACTAAAA AAGTTACTGA CAAGAAGGAA ATATCTAACA AAGAGAAAAA TTCTGGATCA GTAGCAGACT TAAACTTAGA AAATTTTTCT GTCAGAAAAA AAACAGCACC AAAAGTTGAG GAAATTTCAT TATTTGATGA AGAAACTGAA AGTTTGGGGA ATGGAATTCT AACAGAAGCG CTAATTTTAT CTGGCAATTT TGATCCCTTA ATTGGATTGA CTGAGCAAGA TTTTGCGATT TTTAATAAAT AG
|
Protein sequence | MTDKTYVTGS IEAIFFYNPS NFYKVLLIEI DETNAEYDDF EIVVNGTIGD VVEGDSYTFY GQLTQHPKYG EQLQVSQYEK AVPTSGAGLV KYFSSDKFPG IGKKTAEKIV ETFPENTVDS ILEAPEKLDG LLTLARKNSF IKRLRENHGM EKVLTKLAEY GLPSKLTFQI YELYKEETIE KIEENPYQLV EEVKGVGFKT ADKIASELGI EADSPNRFRA ALMHEVNTHS QATGDTYIEA KNLLELTIDL LEEARNIEVN PAEVAAEING LIVDGKVQQE GTKIFENSLF FAEDGIRKSL TALTNRLGKD FADEKLLTVL EEVEKDLEIT YDELQKQAII GAMNQQFFIL TGGPGTGKTT IINGFIETYA RLYQLDLDPD HYNDDVFPIL LAAPTGRASR RMNELTGLPA ATIHRHLGLG QDEAEDALGN ELSGSLLIVD EFSMVDTWLA NKLFQAIPGS MKVLLVGDAD QLPSVGPGQI FADLLKIPEI PSVKLDKIFR QGDDSTITDL AHHIKDGQLP ADFTVKKTDR SYFEVSANFV PQTVEQIASA WQKRGNNPFE LQILAPMYKG AAGINAMNIL LQNLFNPLND RLEFVLGDMK FREGDKVLHL VNDAEANVFN GDLGQIVELI AAKYTDSKQD EIVMDFDGQE LTYPRSEWYK ITLAYAMSIH KSQGSEFSTV IVPMVSSYSR MLERNLLYTA ITRAKQSLIL LGEERAFAQA VAREGANRKT FLVERFKDDK PAAENLSVDS LTKKVTDKKE ISNKEKNSGS VADLNLENFS VRKKTAPKVE EISLFDEETE SLGNGILTEA LILSGNFDPL IGLTEQDFAI FNK
|
| |