Gene LACR_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1888 
Symbol 
ID4434552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1783008 
End bp1783934 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content36% 
IMG OID639667590 
Productparvulin-like peptidyl-prolyl isomerase 
Protein accessionYP_811487 
Protein GI116512580 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATTCA AAAAACTCGG ATTAGTTATG GCTACAGTCT TTGCCGGAGC CGCATTGGTA 
ACCTTGTCTG GTTGCTCAAG CAGTGATTCA GCAAGCAAGG ATATCATCAC AATGAAAGGT
GATACCATTC GCGTTTCTGA TTTATACAAG GAAGCTAAAC AATTCCCGTC ACAACCGACA
AATACTTTGC TTCAAAATTT AACCTTTGAT AAAATTTTTA CTAAAGATTT TGGAAAAGAA
GTTACTGATA AAGATGTCAA CAAAAAAGTT AAATCTCTCA AAGATCAGTA TGGAAGCCAA
TTTGCCTCAG CTTTGCAACA ACAAGGTTTG ACAGAAGCAA GTTTCACACC ATACATGCGT
ACACAAATGC TTGAGCAAGC AGCAATTGAC CACGAAATCG AAGCAACGCA ATATACCGAT
GCCAATCTCA AAAAAGCTTG GGAATCTTAT CATCCAGATG TAACAGCTTA TGTTGTTTCT
GAAACTTCAA AAGATGAAGC GACTAAAGCT TTAGATGCTG CTAAAAAAGA TGATGCTGGT
AAAGCAAGCT TTGAGAAAAC AAATGCTGCA AGTAAAGTCA CTTTTAATTC AACATCAACA
ACTGTGCCAA CTGAGGTTCA AACTGCAGCA TTTAAGTTGA AAAATGGTGA ATTTTCAAGC
GTAATTGAAT CTACTAGTGC ATCAACTGGG GCTACTTCTT ACTACATTGT TGAGATGGTT
AAATCTTCTG AAAAAGGTAG TGACATGAAC AAGTATAAAA AAGAACTTAA AAATGTCATT
AAAGCTGAAA AAGAACAAGA TACAACCTTT GTCAGCGGAG TTATTGCTAA GTACCTTAAA
AAGAATAATG TCACTGTGAA AGAATCTGCT TTTGCATCAA TCTTCTCACA ATTCACTCAA
ACATCAAGTA CATCTTCATC TAAATAA
 
Protein sequence
MKFKKLGLVM ATVFAGAALV TLSGCSSSDS ASKDIITMKG DTIRVSDLYK EAKQFPSQPT 
NTLLQNLTFD KIFTKDFGKE VTDKDVNKKV KSLKDQYGSQ FASALQQQGL TEASFTPYMR
TQMLEQAAID HEIEATQYTD ANLKKAWESY HPDVTAYVVS ETSKDEATKA LDAAKKDDAG
KASFEKTNAA SKVTFNSTST TVPTEVQTAA FKLKNGEFSS VIESTSASTG ATSYYIVEMV
KSSEKGSDMN KYKKELKNVI KAEKEQDTTF VSGVIAKYLK KNNVTVKESA FASIFSQFTQ
TSSTSSSK