Gene LACR_1883 details

Gene Information

• Locus tag: LACR_1883
• Symbol: smpB
• ID: 4434547
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: -
• Start bp: 1777931
• End bp: 1778398
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 639667585
• Product: SsrA-binding protein
• Protein accession: YP_811482
• Protein GI: 116512575
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.254908
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAAAAA ATACAGAAGA TAAGCCGCTA GCTCAGAATA AAAAAGCACG GCATGATTAT 
GAAATTTATG AGACTTTTGA GGCGGGAATT GTGCTGACAG GAACGGAGAT TAAGTCGGTT 
CGGCAGGCAA AAATTCAACT CAAAGATGGG TTTGCCAGAG TTCGCAATGG CGAAGTTTGG 
CTATCAAATG TTCATATTGC GCCATTTGAG CAAGGAAATA TTTTTAATGT TGAGGAGCTG 
CGCACGAGAA AATTATTGCT CAATAAAAAA GAAATTGCTA AGATTGATAA AGAATTATCA 
GGAACAGGAA TTACTTTTAT TCCTTTAAAA GTTTATTTGA AAAATGGCTT TGCCAAAGTG 
CTGATGGGAC TTGCTCGAGG TAAAAAAGAT TATGATAAGC GAGAAAGCCT TAAACGCAAA 
GAGCAAAATC GCGATATTGC AAGACAGCTT AAAGCTTACA ATCGTTAA 

 

Protein sequence

MVKNTEDKPL AQNKKARHDY EIYETFEAGI VLTGTEIKSV RQAKIQLKDG FARVRNGEVW 
LSNVHIAPFE QGNIFNVEEL RTRKLLLNKK EIAKIDKELS GTGITFIPLK VYLKNGFAKV 
LMGLARGKKD YDKRESLKRK EQNRDIARQL KAYNR