Gene LACR_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1865 
Symbol 
ID4432277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp1762766 
End bp1763689 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content42% 
IMG OID639667568 
Productmannose-specific PTS system component IID 
Protein accessionYP_811465 
Protein GI116512558 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 
TIGRFAM ID[TIGR00828] PTS system, mannose/fructose/sorbose family, IID component 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0115202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATA AAAAAGTAAC TCTTGATAAG AAAATCCGTC GTAGCGTTAT GTGGCGTTCA 
ATGTTCCTCC AAGGTTCTTG GAACTACGAA CGTATGCAAA ATGGTGGTTG GGCTTACTCG 
CTCATTCCAG CATTGAAAAA ACTCTACCCT TCTGGCGAAG AAGCTAAAGA AGCTTTGAAA 
CGTCACTTGG AATTCTTTAA TACTCACCCA TACGTTGCCG CTCCTATCAT CGGTGTAACT 
CTTGCCCTTG AAGAAGAACG CGCTAACGGT GCTGATATCG ATGATGCCGC TATTCAAGGG 
GTAAAAGTTG GTATGATGGG TCCTCTTGCC GGTATCGGTG ACCCAGTCTT CTGGTTTACA 
GTTCGCCCTA TCGTTGGTGC TATCGCAGCT TCATTGGCTG TTGGTGGTTC AATCATCGCT 
CCACTCTTCT TCTTCATCGT GTGGAATGCA ATCCGTATCG CTTTCTTGTG GTACACTCAA 
GAATTTGGTT ATAAATCAGG TTCTGCAATC ACTAAAGACC TTGGTGGAGG ACTTCTCCAA 
ACTGTTACTA AAGGTGCATC TATCCTTGGT ATGTTCGTCC TTGGTGTATT GATTCAACGT 
TGGGTAACAA TCAACTTCAA CGGTGCTAAC GCTGTTGTTT CAAAAATTCC TTTACAAAAA 
GGTTCTTACG TAGAATTCCC TAAAGGTTCT GTATCTGGTA CACAACTTCA TGAGATTCTT 
GGTCAAGTAG GTAACAAACT TTCTCTTGAT CCTACAAAAG TAACTTATCT TCAAGATAAC 
TTGAATCAAT TGATTCCTGG TCTTGCTGGT TTGCTTATCA CATTCCTTTG TATGTGGTTG 
CTTAAGAAAA AAGTTTCTCC AATCGTTATT ATCTTTGGTC TCTTCATCGT GGGTATCCTC 
GGTCGTTGGG CTCAAATCAT GTAA
 
Protein sequence
MSDKKVTLDK KIRRSVMWRS MFLQGSWNYE RMQNGGWAYS LIPALKKLYP SGEEAKEALK 
RHLEFFNTHP YVAAPIIGVT LALEEERANG ADIDDAAIQG VKVGMMGPLA GIGDPVFWFT 
VRPIVGAIAA SLAVGGSIIA PLFFFIVWNA IRIAFLWYTQ EFGYKSGSAI TKDLGGGLLQ 
TVTKGASILG MFVLGVLIQR WVTINFNGAN AVVSKIPLQK GSYVEFPKGS VSGTQLHEIL 
GQVGNKLSLD PTKVTYLQDN LNQLIPGLAG LLITFLCMWL LKKKVSPIVI IFGLFIVGIL 
GRWAQIM