Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1801 |
Symbol | |
ID | 4432434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1696618 |
End bp | 1697016 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639667507 |
Product | D-ribose pyranase |
Protein accession | YP_811407 |
Protein GI | 116512500 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00217443 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG AAGTAATATT GAATAGTGAG CTTGCAAAAA TCGCTGATGA TCTGGGACAT ACTGACCAAG TTTGTATTGG AGATTTAGGC TTACCGGTAC CATCAGGTGT CAAAAAAATT GATTTAGCAC TGACACGTGG GAAACCTACT TTTCAAGAAG TTTTGGATAT TTATTTAGAA AATATTCTAG TTGAAAAGAT TTATCTTGCT GACGAGATAA AAGAAAATAA TCCTGAGCAG CTAAAAATTT TACTGACAAA ACTGTCAGCA GATGTTGAAG TTGTTTTTGT CAGTCATGAG ACCTTAAAAT TAATGAATCA TGATGTCAAA GCAGTTGTAA GAACAGGAGA AAATACACCT TATTCTAATA TTATTTTACA ATCAGGTGTT GCTTTGTGA
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Protein sequence | MKKEVILNSE LAKIADDLGH TDQVCIGDLG LPVPSGVKKI DLALTRGKPT FQEVLDIYLE NILVEKIYLA DEIKENNPEQ LKILLTKLSA DVEVVFVSHE TLKLMNHDVK AVVRTGENTP YSNIILQSGV AL
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