Gene LACR_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1798 
Symbol 
ID4432431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp1693189 
End bp1694163 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content36% 
IMG OID639667505 
ProductABC-type sugar transport system, periplasmic component 
Protein accessionYP_811405 
Protein GI116512498 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.482327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAG TAAAAAAATT AACTTTTGCC CTTGTAGCTA CTTTAGCAGT CTCAACTTTG 
ACCGCATGTA GTCTTTATAC CGGAATTCCC GGTCGTGATG GAAAAGAAAA AGTAGAAGAG 
GTCGCACACA AGAAAGCAAA TGAATTAAAT ATTGGTGTTT CTATTTCAAC AATGAACAAT 
CCCTACTTTG TTTCGATGAA CAATGCCATA AAATCAATGG CCAAAGAAAA AAATACAAAA 
TTGACTGTCT CTGATGCTCA AAATGATTCG GCAACTCAAC TCAATAATGT CCAAAATTTC 
ATCAGTCAAA ATGTAGATGC GATTTTAATT AATCCTGTTG ATTATGATGC TATTGTTTCA 
GCGATTAAAG CTGCCAATAA TGCTCATATT CCAGTAATTG CTATGGATAG AGGAGCAAAT 
GGTGGAACTG TTTTAACAAC GGTGGCTTCT GATAATGTTG CAGCAGGTAA AATGGCTGCT 
CAAGCGGTTG AAAAATTGGT TGGGAAAAAT GTAAAAGTTC TCGAACTTTC AGGAACACCA 
GGTGCTTCAG CAACTATAGA TCGTGGAAAA GGATTTAATA GTGAAGCTAA GACCTTAGGA 
TTAAATATAT TATCAAGTCA ATCTGCAAAT TTTTACCGGA CTACTGGTTT GAATACCACT 
CAAAATATGC TGCAATCTCA TAAAGATGGT CAAGCAATCT TTGCACAAAA TGATGAAATG 
GCGCTTGGCG CAGCTAAGGC TGTTCAAGCA AGTGGGCAAA AAATTGCTAT TTTTGGAATT 
GATGGTGAAT CTGAGACTCA TGATGCCATA AAAGCAGGAA CTATGACCGC GACAATTGCT 
CAACAACCAG CTAAGATTGG TGAAATGGCT TTGCAAGCTA CTTATGATTA TTATCAAGGT 
AAAAAAATAG ATCATATCAT TAATTCGCCA ATTTATCTTG TGGATAAAGA TAATGTTGAT 
GAACACAAAT GGTAA
 
Protein sequence
MKLVKKLTFA LVATLAVSTL TACSLYTGIP GRDGKEKVEE VAHKKANELN IGVSISTMNN 
PYFVSMNNAI KSMAKEKNTK LTVSDAQNDS ATQLNNVQNF ISQNVDAILI NPVDYDAIVS 
AIKAANNAHI PVIAMDRGAN GGTVLTTVAS DNVAAGKMAA QAVEKLVGKN VKVLELSGTP 
GASATIDRGK GFNSEAKTLG LNILSSQSAN FYRTTGLNTT QNMLQSHKDG QAIFAQNDEM 
ALGAAKAVQA SGQKIAIFGI DGESETHDAI KAGTMTATIA QQPAKIGEMA LQATYDYYQG 
KKIDHIINSP IYLVDKDNVD EHKW