Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1679 |
Symbol | |
ID | 4432109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 1584097 |
End bp | 1585215 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 639667388 |
Product | integrase |
Protein accession | YP_809598 |
Protein GI | 116512382 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATATAA AAAAACTTAA GAATGAAAAA TATCAATTCA TTCTCAAATA TCAAGATAGA GAAGGGAAAA CACAAAAAGC TAGTATAACA CTTAAAGGGA ACACAAAAGC TATTCAAAAA CAAGCACTTG AAAAACTTAA AGAAAAAGTC CAATTAAATC TTAATAAAGC TGATATTGTA GTTAAAGATT CTACCTTAAA TATAGTATAT GAACAATGGC TAGTGACATT AGTAAATCAA GTTCGGAACA ATAGTTACAC TTCTTATATT TCCGCAATTA AAAGTTTTGT TAAAAAATAT AGTAATTGGA ATATACGAGA TATAAAACCA ATTCATATTC AAAATTATTT AGTAACAAAT GGCTGGAAAA TCAAGACAAT AAAACATAAA AAAGTTATTC TTTATTCTCT TTTTGATTAT GCTAGAAAGA TGACTTATAT TGAACTGAAC CCTGTGAATA ATGTTGTTTT ACCTAAACAT AATTCCAGTG TTGAGGACTT TGAAATAAGT GAGAATAAAA CTATCACTTA TGATGAGCTT AAAATTGTTC TTGAATACTG TCATAAGCAT AATAAAAATC AAAGACTGAC TTTAATTATT GAATTTCTAT TTCTTACTGG TTTAAGACTT GAAGAATTAG GAGGTCTACA AAAATCAAGT GTTGATTTTA AAAAGCAAAC AATAAAAATC AAACATGTTA TTGATACAAA AGCTATTGGT GATAATTCAA GAAAACTTTA TTTACCAAAA ACATTTGCAA GCCGTAGAGA AATTTATGTG AATGATAGAT GTATAGAGAT TTTAAAATGG TTCTTTGATA ACTCACTTGA TGATGATTTT GTTTTCACTA CAATGATTGG TACAACGGTA AAACAAAGTG CTACTTATTT ATTTGTAAGA AATGTCTGTG AAGCATCATT AGGAAAGCAA AAAAATAGAA AATATAATGT TCACATGTTA AGACATGCAC ACATTTCTTT ACTGGCTGAA CTAGATATTC CAATTAAAGC TACTATGAAA CGTGTCGGAC ATTCACAAGA AAGTACAACT CTTAGAATTT ATTCACATGT GTCACAGAAA ATGAATGATT CAATTATGAG AAAACTGAAT GAAATTTGA
|
Protein sequence | MYIKKLKNEK YQFILKYQDR EGKTQKASIT LKGNTKAIQK QALEKLKEKV QLNLNKADIV VKDSTLNIVY EQWLVTLVNQ VRNNSYTSYI SAIKSFVKKY SNWNIRDIKP IHIQNYLVTN GWKIKTIKHK KVILYSLFDY ARKMTYIELN PVNNVVLPKH NSSVEDFEIS ENKTITYDEL KIVLEYCHKH NKNQRLTLII EFLFLTGLRL EELGGLQKSS VDFKKQTIKI KHVIDTKAIG DNSRKLYLPK TFASRREIYV NDRCIEILKW FFDNSLDDDF VFTTMIGTTV KQSATYLFVR NVCEASLGKQ KNRKYNVHML RHAHISLLAE LDIPIKATMK RVGHSQESTT LRIYSHVSQK MNDSIMRKLN EI
|
| |