Gene LACR_1648 details

Gene Information

• Locus tag: LACR_1648
• ID: 4434501
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: -
• Start bp: 1556544
• End bp: 1558415
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 639667357
• Product: ABC transporter ATPase
• Protein accession: YP_809567
• Protein GI: 116512351
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGACT TCATCGCACA AAATTTAAGT AAATCAGTTG GAGAAAAAAC GGTTTTCAAT 
AAAATCAATT TCATCATTCA TGATCTTGAT CGAATTGGAC TTTTAGGAGT AAATGGAACA 
GGTAAAACAA CACTCTTAAA TGTTATTTCA GGACTTTCTG GTTTTGATGG AGATAAATCG 
CCTTTTGACC ATCCACAAAA TTATAAAATT ACTTATTTAA CTCAAGAACC AGATTTTAAT 
CCCAAAGCAA GTATTTTAGA TAGTGTTTTA GATGATTCAC TTCCACAAAT GAGGGCAATT 
AAAAACTATG AAGCGGCGCT TTTGGATTTT GAAAATTTGT CTAAATTAGA GCGTGCTCAG 
TCAGAAATGG ATGCCTTGAA TGCATGGCAA GTAGAAGCAG ATGTCAAAAC AATTTTAACT 
AAACTTCAAC TTCCAGAAGC TACAACAATC ATTGAAAGTC TTTCTGGTGG ACAAAAAAGA 
CGTGTTCAAT TGGCTCAAGC TTTAGTCAAT GATTCAGATT TGTTATTACT TGATGAACCA 
ACCAACCACC TTGATGTTGA GACCATTGCT TGGTTACAAA ATTATCTTAA AAATTCTCGA 
AGAACAGTTC TTTTTGTTAC CCATGACCGT TATTTTTTGG ATAATGTTGC AACACGAATT 
TTTGAGCTTG AAGATGCAGG ATTAAAAGAG TATCAAGGAA ATTATCAAGA TTATTTAGCG 
AAAAAAGCAG AAGATGAAGA ACGTGAAGCC GCAGCGAGTC ATAAAGCCAA ACAACTTTAC 
CAGTCCGAAT TAACTTGGAT TCGTAAATCA CCACAAGCTC GGGCAACCAA ACAACAGGCA 
CGTATTGACC GCTTTGAAGA CCTCAAAGAT TCAATGAAAA CTTCAAAAAA TCAAGAGGAT 
TTGGAATTAA ATATTGCTTC AAGTCGCTTA GGTAAAAAAG TGATTAATTT TAAGAATGCA 
GGATTTTCTT ACCCAGACCG ACAAATTTTC AGCAATTTTG ATTTAATTGT TCAACCTCAT 
TCGCGCTTAG GGATTGTTGG GGATAATGGC GTTGGAAAAT CAACACTCCT CAATGTCATT 
GCTGGAGAAT TAGAATTAAC TGATGGGCTT TTAGAAATTG GGGAAACCGT CAAAATTGGT 
TATTTCAGTC AAGAAATTCG CGGACTTGAT GAAAATAAAC GCATGATAAA TTTCCTTGAA 
GAAGTGGCTT CGGCTGCTCA TAATAATAGT GGCGAGAATA TTTCAATTGT TAATCTATTA 
GAGCAATTTC TCTTTCCAAG AAGTAGCCAC GGAACACTCA TTTCTAAACT TTCTGGTGGT 
GAGAAAAAAC GACTCTATTT ACTAAAGATT TTACTATTAC AACCTAATGT GCTTTTACTT 
GACGAACCAA CCAATGACTT GGATATTGCA ACATTAACCG TACTTGAAAA TTTCCTAGGG 
TCTTTCCCTG GTGCTGTTTT GACCGTTTCA CATGACCGTT ATTTCCAAGA CAAAGTAAGT 
AATGAATTAC TTGCCTTTGA AAATGGAGAA ATCAACCATT ATTTTGGTGC TTACAGTGAC 
TATTTAGCGG TCAAAATGGA AGAAAAAATT GCTGACAAAG CTGTCAGCAA AACTGAAAGT 
CCCGTAATTG CTGACAAAAG AGAAAATACG GACAAAGCCA AACTGACTTA TATGGAAAAG 
AAAGAATGGG AAAACATTGA AAGTCAAATT GCTGAAATTG AAGAACGAAT TTCTGAGATA 
GACACAGAAA TGAATGAAAA TGGTTCTAAT ACAGAACTCT TACTTGACTT ACAAAAAGAA 
TTAGACAATA AAACAAAAGA GCTTGAAGAA AAATATGAAC GTTGGGAATA TCTATCAGAA 
AGGGCCGACT AA 

 

Protein sequence

MADFIAQNLS KSVGEKTVFN KINFIIHDLD RIGLLGVNGT GKTTLLNVIS GLSGFDGDKS 
PFDHPQNYKI TYLTQEPDFN PKASILDSVL DDSLPQMRAI KNYEAALLDF ENLSKLERAQ 
SEMDALNAWQ VEADVKTILT KLQLPEATTI IESLSGGQKR RVQLAQALVN DSDLLLLDEP 
TNHLDVETIA WLQNYLKNSR RTVLFVTHDR YFLDNVATRI FELEDAGLKE YQGNYQDYLA 
KKAEDEEREA AASHKAKQLY QSELTWIRKS PQARATKQQA RIDRFEDLKD SMKTSKNQED 
LELNIASSRL GKKVINFKNA GFSYPDRQIF SNFDLIVQPH SRLGIVGDNG VGKSTLLNVI 
AGELELTDGL LEIGETVKIG YFSQEIRGLD ENKRMINFLE EVASAAHNNS GENISIVNLL 
EQFLFPRSSH GTLISKLSGG EKKRLYLLKI LLLQPNVLLL DEPTNDLDIA TLTVLENFLG 
SFPGAVLTVS HDRYFQDKVS NELLAFENGE INHYFGAYSD YLAVKMEEKI ADKAVSKTES 
PVIADKRENT DKAKLTYMEK KEWENIESQI AEIEERISEI DTEMNENGSN TELLLDLQKE 
LDNKTKELEE KYERWEYLSE RAD