Gene LACR_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1643 
Symbol 
ID4434496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp1552938 
End bp1553645 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content33% 
IMG OID639667352 
Producthypothetical protein 
Protein accessionYP_809562 
Protein GI116512346 
COG category[S] Function unknown 
COG ID[COG4905] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTT TTATGACTTT TATCGTTTAT TCTTTCATTG GTTGGCTTTG GGAAACTTTC 
TATTGTTCAC TTAAAGACCG ACATTTTGTT TTTAGAGGTT TTTTATTAGG CCCTTATTGC 
CCTGTCTACG GTTTTGGTGT GTCAGCAGTC TTACTTTTAG TTCCAGATAC TGGAAATTTA 
TTTAGTCTTT ATCTTAATAC AATAGTGATT GTGACCGTGG TTGAATTTAT CGGTAGTTGG 
ATTTTAGAGA AATTCTTTAA TATGAAGTTA TGGGACTACT CAACCCTCCC TTTCAATATT 
GAAGGCAGGG TAGCTGTTCC CGTTTCATTA TTTTGGGGTG TAGGTTGTAT TATCTTAATT 
AAATTAGTTA ATCCACCTGT TCAAAATTGG ATTCATGATT TTAATGCAAT CACGCATAGT 
TGGGGAGTGC TTCTCATATT AATTATTTTT GGAGCTGACC TTCTATCAAC GTTTATCTTT 
ACGATTTCAA CCAAAAAAGA AGTATTGTCT ATGATTGATG ATTCTGATAA AGAAAATGCG 
GCTATTAAAG AGTTTCGTCT TAAACATTTG CTGACCAATC ATGAAACCGC ACCAAACCGC 
AAAAAAGTAT TGGAACTTCT GAAGAACCGT CCTTTGAAAT TAAAACACTA TAACTTACGA 
AGAATTCTTA AAAATTATCC AAACATGAAT TTGACAAAAA AACGCTAG
 
Protein sequence
MELFMTFIVY SFIGWLWETF YCSLKDRHFV FRGFLLGPYC PVYGFGVSAV LLLVPDTGNL 
FSLYLNTIVI VTVVEFIGSW ILEKFFNMKL WDYSTLPFNI EGRVAVPVSL FWGVGCIILI 
KLVNPPVQNW IHDFNAITHS WGVLLILIIF GADLLSTFIF TISTKKEVLS MIDDSDKENA 
AIKEFRLKHL LTNHETAPNR KKVLELLKNR PLKLKHYNLR RILKNYPNMN LTKKR