| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1596 |
|---|
| Symbol | |
|---|
| ID | 4434467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | - |
|---|
| Start bp | 1507014 |
|---|
| End bp | 1508183 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639667309 |
|---|
| Product | xylose isomerase |
|---|
| Protein accession | YP_809519 |
|---|
| Protein GI | 116512303 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2115] Xylose isomerase |
|---|
| TIGRFAM ID | [TIGR02630] xylose isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTACT TTAACGACAT CGCACCTATC AAATACGAAG GTACAAAAAC TAAAAACATG
TTTGCCTTCC GCCATTATAA CCCAGAAGAA GTGGTTGCTG GGAAAACAAT GGAAGAACAG
CTTCATTTCG CCCTTGCTTT TTGGCATACA ATTACGATGG ACGGGGCTGA CCCATTTGGT
AGTGCCACAA TGGAACGTCC TTGGGACTTG GAAGGTGGCT CTGAACTTGA CCGTGCTCAT
CGTCGAGTAG ATGCTTTCTT TGAAATTGCC GAAAAATTGG GTGTTAAATA TTATTGTTTC
CATGATATTG ACATCGCGCC TACAGGAAAT TCTTTGAAAG AATTTTATGC AAACTTAGAT
GAAATTACTG ACCATCTTCT TGAAAAACAA AAAGAAACAG GCATTAAACT CCTCTGGAAT
ACGGCAAATA TGTTCTCAAA CCCACGTTAT ATGAATGGGG TTTCGACATC AAATCGTGCT
GAAGTTTTTG CTTATGGTGC TGCTCAAGTC AAAAAAGGAC TTGAACTTTC TAAAAAACTT
GGTGGTGAAA ACTATGTATT CTGGGGTGGT CGTGAAGGTT ACGAATCACT TTTGAACACA
GACATGGGTC TTGAAATGGA TCACATGGCA AAATTCTTCC ATTTGGCGAT TGATTATGCA
AAATCAATTA ACCATTTGCC AATCTTCTTG ATTGAACTAA AACCAAAAGA ACCAATGACT
CACCAATACG ACTTTGATGC AGCGACAGCT CTTGCTTTCT TGCAAAAATA TGATTTGGAC
AAATATTTCA AACTCAATAT TGAAACAAAC CATGCTTGGT TGGCTGGTCA TACTTTTGAA
CACGAATTAA ATACTGCACG TACTTTTGGT GCCTTAGGTT CAATCGATGC CAATCAAGGA
AATTATTTGC TCGGCTGGGA TACTGATGAA TTTCCAACAC TTGTCATTGA TATCACGTTG
CAGGGATGGA TACTTATGCA CGTGCGCTTA AAGGTGCAGC AGCCATCATT GAAGACAAAT
TCTTGTCTGA TATCGTTGAA GAACGTTATA GTTCATACAA GAAGACAGAA GTTGGTCAAT
CTATCGAAAA TGGAACAGCA ACTTTTGAAA GTCTTGCTGC TTATGCTCTT GAGCATGGGG
ATGACATCGA ACTTGATTCT AACCACTTAG
|
|---|
| Protein sequence | MAYFNDIAPI KYEGTKTKNM FAFRHYNPEE VVAGKTMEEQ LHFALAFWHT ITMDGADPFG
SATMERPWDL EGGSELDRAH RRVDAFFEIA EKLGVKYYCF HDIDIAPTGN SLKEFYANLD
EITDHLLEKQ KETGIKLLWN TANMFSNPRY MNGVSTSNRA EVFAYGAAQV KKGLELSKKL
GGENYVFWGG REGYESLLNT DMGLEMDHMA KFFHLAIDYA KSINHLPIFL IELKPKEPMT
HQYDFDAATA LAFLQKYDLD KYFKLNIETN HAWLAGHTFE HELNTARTFG ALGSIDANQG
NYLLGWDTDE FPTLVIDITL QGWILMHVRL KVQQPSLKTN SCLISLKNVI VHTRRQKLVN
LSKMEQQLLK VLLLMLLSMG MTSNLILTT
|
|---|
| |