Gene LACR_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1532 
Symbol 
ID4434594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1450975 
End bp1451658 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content34% 
IMG OID639667251 
Product16S RNA G1207 methylase RsmC 
Protein accessionYP_809461 
Protein GI116512245 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0496562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAGTG TAAGAGATTA CAAAATAGGT GGAATTTCTA AAAATTTTTT GAAGATAAAA 
AAGGGCTTTT ATGTTAAAAT TAAATCAATG GTTAAAACAA ATATGTATTA TGAAGATAAT
CAAGATCTTT CGCATGACTT CCAAACACTA ACAGTTGATT TACTAGGACT GTCAATGCGT
TTTAAAACTG ATCGTGGTGT CTTTTCAAAA AATGGAATTG ATTATGGTTC ACGTGTTTTA
TTAGAGGACT ATCAGCCCGA AGGCGCAAAA ACGCTTTTAG ATGTTGGCTG TGGCTATGGA
ACACTGGGAT TGACCTTAGC TAAAAAGTTT GATTTAAGTG TGACAATGGT AGATGTCAAT
AGTCGGGCGC TTGATTTATG TCGCCAAAAT GCAATTGATA ATGCTGTCAG TAATACTGAA
ATTGAACTTT CAAATATCTA TGAAGCTGTC AGTGAAAAAT ATGATGCAAT TATCTCAAAT
CCTCCCATTA GGGCTGGGAA AGAAGTCGTT CATGAAATTT TAACTGGTGC CTTTGATTAT
CTTAATGATG GTGGACATTT AACAATTGTA ATTCAAAAAA AACAAGGAGC TCCATCTGCT
CAAAGAAAAA TGGAAGAGGT CTTTGGCAAC TGTCAGCTAG TGGCAAGGGA TAAAGGATAC
TTTATTCTTA GAAGTTATAA ATGA
 
Protein sequence
MKSVRDYKIG GISKNFLKIK KGFYVKIKSM VKTNMYYEDN QDLSHDFQTL TVDLLGLSMR 
FKTDRGVFSK NGIDYGSRVL LEDYQPEGAK TLLDVGCGYG TLGLTLAKKF DLSVTMVDVN
SRALDLCRQN AIDNAVSNTE IELSNIYEAV SEKYDAIISN PPIRAGKEVV HEILTGAFDY
LNDGGHLTIV IQKKQGAPSA QRKMEEVFGN CQLVARDKGY FILRSYK