Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1532 |
Symbol | |
ID | 4434594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1450975 |
End bp | 1451658 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639667251 |
Product | 16S RNA G1207 methylase RsmC |
Protein accession | YP_809461 |
Protein GI | 116512245 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0496562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAGTG TAAGAGATTA CAAAATAGGT GGAATTTCTA AAAATTTTTT GAAGATAAAA AAGGGCTTTT ATGTTAAAAT TAAATCAATG GTTAAAACAA ATATGTATTA TGAAGATAAT CAAGATCTTT CGCATGACTT CCAAACACTA ACAGTTGATT TACTAGGACT GTCAATGCGT TTTAAAACTG ATCGTGGTGT CTTTTCAAAA AATGGAATTG ATTATGGTTC ACGTGTTTTA TTAGAGGACT ATCAGCCCGA AGGCGCAAAA ACGCTTTTAG ATGTTGGCTG TGGCTATGGA ACACTGGGAT TGACCTTAGC TAAAAAGTTT GATTTAAGTG TGACAATGGT AGATGTCAAT AGTCGGGCGC TTGATTTATG TCGCCAAAAT GCAATTGATA ATGCTGTCAG TAATACTGAA ATTGAACTTT CAAATATCTA TGAAGCTGTC AGTGAAAAAT ATGATGCAAT TATCTCAAAT CCTCCCATTA GGGCTGGGAA AGAAGTCGTT CATGAAATTT TAACTGGTGC CTTTGATTAT CTTAATGATG GTGGACATTT AACAATTGTA ATTCAAAAAA AACAAGGAGC TCCATCTGCT CAAAGAAAAA TGGAAGAGGT CTTTGGCAAC TGTCAGCTAG TGGCAAGGGA TAAAGGATAC TTTATTCTTA GAAGTTATAA ATGA
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Protein sequence | MKSVRDYKIG GISKNFLKIK KGFYVKIKSM VKTNMYYEDN QDLSHDFQTL TVDLLGLSMR FKTDRGVFSK NGIDYGSRVL LEDYQPEGAK TLLDVGCGYG TLGLTLAKKF DLSVTMVDVN SRALDLCRQN AIDNAVSNTE IELSNIYEAV SEKYDAIISN PPIRAGKEVV HEILTGAFDY LNDGGHLTIV IQKKQGAPSA QRKMEEVFGN CQLVARDKGY FILRSYK
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