Gene LACR_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1524 
Symbol 
ID4434586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1444088 
End bp1445641 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content34% 
IMG OID639667243 
ProductSignal transduction histidine kinase 
Protein accessionYP_809453 
Protein GI116512237 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.13171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA AACACATCAT GCTGATGACA GTGCTGTACA TCATTGCAAC ACTAAGCTTG 
GTGATTCTAT CGAACCAAAA TATCTTAGAA AATGATACAA ATAGGGTATT AAAAACAATA
GATCAAATAC AGCTTTTTTT AGAAAAACAT CCTGATAATC CCTTACCCGC TAACTTTGAA
CATCTTTCAA AAAATACGGT AAATTCAGAT ACTAAAAAAA TTAAAAATGG CGCTGCCTAT
GCTCGAAGTT TAGATTCTAA AGATATTACT GTTACCAGCC CTATCTTTAG TGAAGGACAA
ATCGATGGCT ATTTGAAAGT TACAGAAAAT CGCACGTCTA CTTTCTTTAC CGATTTTGCA
ATTATCATTT TTGCTATTTT ATTTTACTTG GCAGTTGCCA TACAGGTTTT GAAATCTGCT
CAGAGAGCTT ATGTTTTTCG CGAAAATACT GTGGCTAAGA TTAAAAATAT TGAGCGAAGT
CCTTTAACGC AAAGTTATCT GATGAATGAA AATGATGACA AAATTACAAC TGAGCTCAAT
AAATTAGGCG AAAAAATCCA AAAGCAAGCC TTATCACACA CTGAAAAGAA AGAAAATCTC
TACGAATTCA TCGAGTTTTT CCAATTTCCC ATTTTTATTT ATAATAATAA GGGAAAAATT
CGTCGAACAA ATGCTTCTTT CAAAAATGAG TTTTCAGACA CCGAGAATCT TGATATTTTC
AGTCCTTATG CCGATTTCTT AAATTTTCTA GTTGACAAAA TTTTACATCC AGATATACAA
GAAAAACTTT TCTTCTTTGA AAAGCTTGGC GCTTATTATC AAGTCCGCAT CACTCCACTG
CCCGATCTTG ATAGTCGCTT CATGGTAACC ATGAATGATG TAAGTTCTTA TCGTCGAACA
GTTGATGCTC ATAATGCCTT TATTGCCAAC GTTTCTCATG AATTGAAAAC ACCGCTCACT
TCAATAAAGG GCTTTGCCGA ATTACTTGAA ACAGACACTG TTTCTCCTTC TGAAACCAAA
AACTTTGCTT CAATTATCCA TAAAGAAAGT TCTCGTTTGA TGAGCCTTGT TCAGGATACT
CTACTACTAA CTAAGCAAAA TCAACGTATT GAGAAAAAGA AACTCAGCCT TTCTGCTCTA
ATTCAAAATA TTTTACAAAG CTCAAGTCCC CAAATTTCTG AAAAATCTCT TCGTTTAGAA
ACACAAATTG AAGAGATTAC TTTCAAAACC AATGAACAAA TGGTACACAG TATTTTTGAA
AATCTGATTG AAAATGCCAT CAAATATACT CCTGCTCAGG GTCAAATTTT TGTCAGCTTA
CACCATGAAC AAGATAAAAT TATCTTCAGT GTTACTGACA ATGGTCCTGG TTTAAGTGAA
ATTGAAAAAG AAAGAATCTT TGATCGCTTC TATCGTGCTG ATGAGAGCCG AGCAGAGGTC
AGCGGAACAG GATTAGGACT CGCCATTGTT GAAAAGAATG TCCAAGAACT TCATGGCACA
ATTGATGTGG TATCTATTCT TGGAAAAGGA ACCACCTTTA CCGTTAATCT TTGA
 
Protein sequence
MKLKHIMLMT VLYIIATLSL VILSNQNILE NDTNRVLKTI DQIQLFLEKH PDNPLPANFE 
HLSKNTVNSD TKKIKNGAAY ARSLDSKDIT VTSPIFSEGQ IDGYLKVTEN RTSTFFTDFA
IIIFAILFYL AVAIQVLKSA QRAYVFRENT VAKIKNIERS PLTQSYLMNE NDDKITTELN
KLGEKIQKQA LSHTEKKENL YEFIEFFQFP IFIYNNKGKI RRTNASFKNE FSDTENLDIF
SPYADFLNFL VDKILHPDIQ EKLFFFEKLG AYYQVRITPL PDLDSRFMVT MNDVSSYRRT
VDAHNAFIAN VSHELKTPLT SIKGFAELLE TDTVSPSETK NFASIIHKES SRLMSLVQDT
LLLTKQNQRI EKKKLSLSAL IQNILQSSSP QISEKSLRLE TQIEEITFKT NEQMVHSIFE
NLIENAIKYT PAQGQIFVSL HHEQDKIIFS VTDNGPGLSE IEKERIFDRF YRADESRAEV
SGTGLGLAIV EKNVQELHGT IDVVSILGKG TTFTVNL