| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1484 |
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| Symbol | |
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| ID | 4433593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1406322 |
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| End bp | 1406855 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639667205 |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_809415 |
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| Protein GI | 116512199 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000142179 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTATTT TATTTAATAA ACCTTTTGAT GTACTGACAA AATTTACCGA TGGAGAGGGC
CGCAAAACTT TAAAAGATTA TATAGAAATA CCAAATGTTT ATGCGGCAGG CAGATTGGAT
AAAGATAGTG AAGGTCTACT TTTACTGACA GATGATGGAA AGCTCAATCA TTTGCTGACA
GACCCCAAAT CGAAGTCTTT TAAAACTTAT TTAGTTCAAG TTGAGGGAGA ATTTTCGATA
GAAGCGGCAC AAAAATTGGA AAAAGGTGTC TTACTCAAAG ATGGTAAAAC GCTACCTGCT
AAAGTGAAAT TAATTGATGA ACCTGAGTGG CTTTGGGAAC GGACGCCCCC TATTCGAGAG
CGAAAAGCAA TTCCGACAAG CTGGGTGGAA ATTTCAATTA AAGAAGGAAA AAATAGACAG
ATTAGAAGAA TGACAGCGGC GGTAGGCTTT CCAACACTTC GTTTAATTCG CTGGTCAATT
GGACAATACA CGCTTGGAAA TCTAAAATCT GGCGACTATA AAATCATTAA ATAA
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| Protein sequence | MIILFNKPFD VLTKFTDGEG RKTLKDYIEI PNVYAAGRLD KDSEGLLLLT DDGKLNHLLT
DPKSKSFKTY LVQVEGEFSI EAAQKLEKGV LLKDGKTLPA KVKLIDEPEW LWERTPPIRE
RKAIPTSWVE ISIKEGKNRQ IRRMTAAVGF PTLRLIRWSI GQYTLGNLKS GDYKIIK
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