| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1471 |
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| Symbol | |
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| ID | 4433580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1392469 |
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| End bp | 1393833 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 639667193 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_809403 |
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| Protein GI | 116512187 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00462633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA ACAACCATTT CCACTTATTA GGGGCAGTGA TTGCTACAGG TATTTTGTCG
TTTTCTGGTG TTCTGATTGA AACCGCGATG AATGTGACTT TCCCAACGCT CATTCATGAG
TTTGGACTTT CTACATCAAA AATACAATGG GTAACGACGA TTTATCTTCT TGTGATTGCG
ATTACGATTC CTCTCTCTTC TTATTTTAAT GAGCGCTTTT CGGCAAGAAA GCTTTTCTTG
ATTGCCAACC TTTTCTTTTT AGTTGGAGTC TTAACCAACT GTTTCTCAGC GAATTTTGCT
ATGCTTTTGT TTGGCCGCCT TTTACAAGGG ATTGGGACAG GGATTGGTTT ACCTCTGATG
TTCCATATTA TATTAACTAA GGCACCTCTT CATAAAAGAG GAATGATGAT GGGAATTGGA
ACTCTAACAA CCTCTATTGC GCCAGCTATT GGCCCAACTT ATGGGGGAAT TATTGCTCAT
GCGCTTGATT GGCGCTATAT CTACATCTTT TTACTTCCTT TAGTTATCAT TTCCTTATTT
CTTGGTTTAG CTGCCCTTCC AAGAGAAATT GCAAAAACAC CAAAAAAATT GGCCTTTCGT
CCAGTTATTG CCTTGTCAAT TATGTTCTTT GCCTTTATTT CGGCTTTGAG TGCAGAACAT
TTGCTTACTT TCGCACTTTT GTTCGTCATC GGAATGATTG GAGCAGTCAT GTTTGTTCGT
TTCAATCGTA AAGAAACGTT AATTGATTTG GGAATCATGA AAAATCGTCG CTTCGTAGCC
TTAATTTTTA GTCTTTTAGT TTATCAAGCT TTATTATTAG GTTTATCATT TATTTTGCCA
AGTTTTCTTC AAGTATCAGC AGGATTTAGT TCATCTGTTG CCGGAATATT TATGTTTCCT
GGAGCTTTGA TAGGGGCTGT TTTGGCTCCG ATTTCTGGTA AAATCTTAGA CCAAATTGGG
GCAAGAAAGC CGATTACGAC AGGTTTAGTT TTAGCGGCTT TGGGGCTCGT TTTGCTTTTT
GTATTTTTAC CGACCAAGAG TCTCGCTCTC CTTTTGATTG CGCACATTGT TTTGATGTTA
GGTTTGGGAA TTTCTTATAG TAATTTGATG ACTTGCAGTT TGGGTACCTT GTCAACGGAG
GAGCTTTCTG ATGGAAATGC TTTGGTCAAT ACTTTACAAC AATTTATCGG AGCGGTCGCA
ACAGCAGTAG TTGCAACAAC CCTTTCACTC TTCCAAGGTC TTAATGGTTT CAAAACTGGA
ACAAGCCAAG GAACTTCAAT TATTTTAGCT TTATTTTTCA TCTTAATTAT TGTCAGTTTG
ATTGTAAGTT TCCCAAATTT GAAAAAAATA AACGCAAATC ATTAA
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| Protein sequence | MNKNNHFHLL GAVIATGILS FSGVLIETAM NVTFPTLIHE FGLSTSKIQW VTTIYLLVIA
ITIPLSSYFN ERFSARKLFL IANLFFLVGV LTNCFSANFA MLLFGRLLQG IGTGIGLPLM
FHIILTKAPL HKRGMMMGIG TLTTSIAPAI GPTYGGIIAH ALDWRYIYIF LLPLVIISLF
LGLAALPREI AKTPKKLAFR PVIALSIMFF AFISALSAEH LLTFALLFVI GMIGAVMFVR
FNRKETLIDL GIMKNRRFVA LIFSLLVYQA LLLGLSFILP SFLQVSAGFS SSVAGIFMFP
GALIGAVLAP ISGKILDQIG ARKPITTGLV LAALGLVLLF VFLPTKSLAL LLIAHIVLML
GLGISYSNLM TCSLGTLSTE ELSDGNALVN TLQQFIGAVA TAVVATTLSL FQGLNGFKTG
TSQGTSIILA LFFILIIVSL IVSFPNLKKI NANH
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