| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1465 |
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| Symbol | |
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| ID | 4433223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | + |
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| Start bp | 1387282 |
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| End bp | 1388241 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639667187 |
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| Product | geranylgeranyl pyrophosphate synthase |
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| Protein accession | YP_809397 |
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| Protein GI | 116512181 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00436047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTAA AAAATAACTT TTGGAAAGAC TATCCAGCAC TTGAGAAGGA ATTAGCTCAA
GTGCATCAAT TAATGAAAAG CCATGTTACC ATCAAAAATT CTGATGTCAA ATCGGCTATT
TTTGATATTT TTGACGCAGG TGGGAAAATG TTACGCCCTG CTTATCTGCT TCTATTTTCA
GGATTCACTG ACCTTTCGGA GAGCGAGCGA TTGGCTCTTG CTGCTTCTGT CGAAATGATG
CACACGGCAA CTTTAGTACA TGATGATGTG ATTGATCATG CTGATACCCG ACGTGGAGTT
GCCACCTTGT CAGCAAAATA TGGGCCTGAA ATTGCTGTTT ATGCCGGAGA CTATCTCTTT
ATTGCTGTCA TTCGTTTAAT GTCTGAACAC TCATTAGAAT TGTCAAATTT AACTAAAAAC
ATTGGGTCAA TTGAGCGTTT GTTAGGTGGC GAATTGGGTC AACTTAATCA TTATTTTAAT
CTTCAACAAA CTTTGGATGA TTATATTGAA AACATTTCGG GAAAAACGGG AGAACTTTTT
GCACTATCTG CTTCTGTTGC TCCTTTGATT TCCAAGAATA ATGCTCTGAC AAAACGAGCC
TACAAAATCG GGATGAATAT TGGAATTTCT TTCCAAATCA TGGACGATTA TTTGGACTAT
GCTTCAACGG CTCAAACCCT TGGTAAACCA GTCCTTGAAG ACATCAAACA AGGCATCTAT
TCGGCTCCTG TCCTCTTTGC TTTGCAGGAA AATAATGCTT TAGTTTCTGA ATTAATTAAA
AATGAAAAAT TCGATGAAGT TTATGATTTT ATCAAAACTT CTGATGCCCT TGAAAAAACC
AAAGAACTTG CGAAATCTTA CACCCTTTCA GCATTAAATT TAATTGATAA ATTACCAAAA
GGTAAAAATC GTGAGCTGAT TGCTGAAATT ACTAGAAAAC TTTTGGAGCG AACTTTATGA
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| Protein sequence | MDLKNNFWKD YPALEKELAQ VHQLMKSHVT IKNSDVKSAI FDIFDAGGKM LRPAYLLLFS
GFTDLSESER LALAASVEMM HTATLVHDDV IDHADTRRGV ATLSAKYGPE IAVYAGDYLF
IAVIRLMSEH SLELSNLTKN IGSIERLLGG ELGQLNHYFN LQQTLDDYIE NISGKTGELF
ALSASVAPLI SKNNALTKRA YKIGMNIGIS FQIMDDYLDY ASTAQTLGKP VLEDIKQGIY
SAPVLFALQE NNALVSELIK NEKFDEVYDF IKTSDALEKT KELAKSYTLS ALNLIDKLPK
GKNRELIAEI TRKLLERTL
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