Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1414 |
Symbol | |
ID | 4434068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1327759 |
End bp | 1328649 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639667141 |
Product | transposase |
Protein accession | YP_809351 |
Protein GI | 116512135 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.184342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTATA ATAGCACACT CCCAAAAGTT TTTGTTTATT TACTGACAAC CATTGAGACG CATTATCAAA CGAGGGTTCC CCTTGAGGTT CAAAACCGAA AGAACGTCCA TCTCGCAACA TCAGATTGCT TAGTTATCGC TTGTTACCTA TGGGGCGTAC TGCATTTTAG TGAAACGCTT AAAGCTAAGC ACCAACTTGC TCAAAGTTTA TTTCCTAATT TCCTAGAATA TTATCGCTTT GTCCCCCGTT GTAATGCCCT CTTACCGAGT ATCCAAGTCA TTCGCCAAGC ACTCGTCTTT AAAGAGGTTG AAGGAATGAG TGTATCCATT ATTGACAGCT TCCCCATTCC TTTGTGTCAG CCTATTCGTA ATTTCAGAAG CAAAGTTCTT GGAGATTATG CAAATGTTGG CTACAATGCT ACAAAGGGAC AGTACTTCTA TGGATGTAAA TGTCATGCTT TAGTCAGTGA ATCAGGCTAT GTCATAGACT ACACAATTAC TCCTGCTTCA ATGGCTGATA GTTCAATGGC CGAGGAAGTG TTGAGTCAAT TTGGGACACC AACAGTCCTT GGAGATATGG GATATTTAGG TCAGTCACTG CATGATAGGC TGGAATTAAA AGGAATTGAT CTAATGACAC CTGTCAGGAA GAACATGAAG CAAAAGAAAA TCCTTTTCCC TAATTTTTCA AAACGTAGAA AAGTGATTGA GCGAGTTTTC TCTTTTTTGA CAAATCTAGG AGCTGAGCGT TGTAAAAGTC GTTCGCCTCA AGGTTTTCAA TTGAAATTAG AGATGATACT TTTAGCGTAT TCTTTACTGT TAAAATCAGC TAAATCACTG GAACCAGAGA CTTTAAGATA TTCTATCGGG TATCAAGTCA TGGCTAAATA A
|
Protein sequence | MTYNSTLPKV FVYLLTTIET HYQTRVPLEV QNRKNVHLAT SDCLVIACYL WGVLHFSETL KAKHQLAQSL FPNFLEYYRF VPRCNALLPS IQVIRQALVF KEVEGMSVSI IDSFPIPLCQ PIRNFRSKVL GDYANVGYNA TKGQYFYGCK CHALVSESGY VIDYTITPAS MADSSMAEEV LSQFGTPTVL GDMGYLGQSL HDRLELKGID LMTPVRKNMK QKKILFPNFS KRRKVIERVF SFLTNLGAER CKSRSPQGFQ LKLEMILLAY SLLLKSAKSL EPETLRYSIG YQVMAK
|
| |