Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1402 |
Symbol | |
ID | 4434056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1311333 |
End bp | 1311938 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639667130 |
Product | hypothetical protein |
Protein accession | YP_809340 |
Protein GI | 116512124 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.558684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAATA CACTTATTAT TGCGACTAGA AATCCTGGTA AAACAAAAGA ATTTAAAAAA TTGTTTGCTG ACTTTGGTTA TGAAATTAAA GACTTATCAG ACTACCCAGA ACTTCCTGAA ATTGAAGAAA CAGGAAGTAC TTTTGAAGAA AATGCTCGCT TAAAAGCAGA ACAAATTGCT GAGTTGACTG GACAAGTAGT TATTGGAGAC GATTCAGGAC TATGTGTTGA TGTACTAGGT GGTTTGCCAG GCATTTGGTC ACACCGCTTT TCAGCACCAG ACCCTACTGA TGAGAAAAAT ATTGCCAAAC TTTTGCATGA ACTTGCTCCG ACAGCAATTA CACCAGAACG TAGAAGCGCT CATTTCCATA CTACTTTAGT AGCGGCAAGA CCTAATCACG ACAGCTTAGT TGTTGAAGCT GATTGGAATG GCTATATCGC CTTTGCTCCT AAAGGGGGAA ATGGCTTTGG TTATGATCCT GTTTTTATGG TTGATGCTTT CAGAACCGCT GCAGAATTAT CAGAAAAAGA AAAAAATCAA CTTTCACATC GAGGTCAAGC ACTAAGAAAA TTAATGCAGG AACTTCCAGA ATGGTTAGAG AAATAA
|
Protein sequence | MENTLIIATR NPGKTKEFKK LFADFGYEIK DLSDYPELPE IEETGSTFEE NARLKAEQIA ELTGQVVIGD DSGLCVDVLG GLPGIWSHRF SAPDPTDEKN IAKLLHELAP TAITPERRSA HFHTTLVAAR PNHDSLVVEA DWNGYIAFAP KGGNGFGYDP VFMVDAFRTA AELSEKEKNQ LSHRGQALRK LMQELPEWLE K
|
| |