Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1380 |
Symbol | |
ID | 4433159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1291713 |
End bp | 1292603 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639667112 |
Product | transposase |
Protein accession | YP_809322 |
Protein GI | 116512106 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.389447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTATA ATAGCACACT TCCAAAAGTT TTTGTTTATT TACTGACAAC CATTGAGACG CTTTATCAAA CGAGGGTTCC CCTTGAGGTT CAAAACCGAA AGAACGTCCA TCTCGCAACA TCAGATTGCT TAGTTATCCC TTGTTACCTA TGGGGCGTAC TGCATTTTAG TGAAACGCTT AAAGCTAAGC ACCAACTTGC TCAAAGTTTA TTTCCTAATT TCCTAGAATA TTCTCGCTTT GTCCCCCGTT GTAATGCCCT CTTACCGAGT ATCCAAGTCA TTCGCCAAGC ACTCGTCTTT AAAGAGGTTG AAGGAATTAG TGTATCCATT ATTGACAGCT TCCCCATTCC TTTGTGTCAG CCTATTCGTA ATTTCAGAAG CAAAGTTCTT GGAGAGTATG CAAATGTTGG CTACAATGCT ACAAAGGGAC AGTACTTCTA TGGATGTAAA TGTCATGCTT TAGTCAGTGA ATCAGGCTAT GTCATAGACT ACACAATTAC TCCTGCTTCA ATGGCTGATA GTTCAATGAC CGAGGAAGTG TTGAGTCAAT TTGGGACACC AACAGTCCTT GGAGATATGG GATATTTAGG TCAGTCACTG CATGATAGGC TGGAATTAAA AGGAATTGAT CTAATGACAC CTGTCAGGAA GAACATGAAG CAAAAGAAAA TCCTTTTCCC TAATTTTTCA AAACGTAGAA AAGTGATTGA GCGAGTTTTC TCTTTTTTGA CAAATCTAGG AGCTGAGCGT TGTAAAAGTC GTTCGCCTCA AGGTTTTCAA TTGAAATTAG AGATGATACT TTTAGCGTAT TCTTTACTGT TAAAATCAGC TAAATCACTG GAACCAGAGA CTTTAAGATA TTCTATCGGG TATCAAGTCA TGCCTAAATA A
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Protein sequence | MTYNSTLPKV FVYLLTTIET LYQTRVPLEV QNRKNVHLAT SDCLVIPCYL WGVLHFSETL KAKHQLAQSL FPNFLEYSRF VPRCNALLPS IQVIRQALVF KEVEGISVSI IDSFPIPLCQ PIRNFRSKVL GEYANVGYNA TKGQYFYGCK CHALVSESGY VIDYTITPAS MADSSMTEEV LSQFGTPTVL GDMGYLGQSL HDRLELKGID LMTPVRKNMK QKKILFPNFS KRRKVIERVF SFLTNLGAER CKSRSPQGFQ LKLEMILLAY SLLLKSAKSL EPETLRYSIG YQVMPK
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