| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1350 |
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| Symbol | |
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| ID | 4432094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1258368 |
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| End bp | 1259624 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 639667083 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_809293 |
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| Protein GI | 116512077 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.182598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATATT CAGAAGATAC AATTGACTTT TTACATCAGG GAGACCTGAT TGGAATGCAA
AATTCACTTG CAAAAGCATT AAAAAATGAT AATAATGAAA TGTTGGCTGA CCTTGCCGAA
TATCTGCAAA TGATGGGTTT TATTGATGAA AGTCAAAAAA TTTATGACCA AATCATGTCT
GAACACCCAG AGTCAACGGA TTATCTGATT AATTTAGCAG AGATAGCTGA AGATAATGGT
AATTTAGATG AAGCTCTGAA CTATCTTTAT CAAATTCCAG TAGACGATGA AAACTATATT
GCTGCACTCG TTAAAATTGC TGATTTATAT CAGTATGAAG GTGATTTTGA AACAGCAATT
TCAAAATTAG AAGAAGCACG AGAATTATCA GATTCTCCGC TTATCACCTT TGCTTTAGCT
GAATCTTTTT TTGAACAAGG TGATTATTCA GCCGCAATTA CAGAATATGC CAAACTTTCA
GAACGTAAAA TTTTGCATGA AACAAAAATA TCTATTTACC AAAGAATTGG CGATTCTTAT
GCTCAATTAG GTAATTTTGA GAATGCCATT TCATTTCTTG AAAAATCATT TGAATTTGAT
GAAAAACCTG AAACTTTATA TAAAATCGCT CTTCTTTATG GAGAAATTCA TAACGAAACA
AGAGCTATTG CTAATTTCAA ACGATTAGAG AAAATGGATG TTGATTTCCT GAACTATGAG
TTAGCTTATG CTCAAACATT GGAAGCCAAT CAAGAATTTG AAGCTGCACT AGAAATGGCA
CAGAAAGGTT TGAATAAAAA TCCAAATGCC GTTCCTTTAC TTCATTTCGC CTCAAAAATT
AGTTTCAAAT TAAAAGATAA AGCAGCAGCA GAACGTTACC TCATGGATGC CTTGAACTTA
CCAGAGTTAC ATGATGAAAC AGTCTTTCTA CTTGCTAACT TGTACTTTAA TGAAGAAGAT
TTTGAAGCGG TCATTAATCT TGAAGAACTT TTAGAAGATG AACATTTATT AGCTAAATGG
CTTTTTGCAG GAGCACATAA AGCTTTAGAA AAGGATTCTG AAGCGACTGC TCTGTATGAA
GAACTCATCC AAACCAACTT GTCAGAGAAT CCAGAGTTTT TAGAAGACTA TATTGATTTT
CTTAAAGAAA TTGGTCAAAT TTCTAAAACA GAACCAATTA TTGAACAATA TTTGGAACTC
GATCCAGATG ATGAAAATAT GAGAAATTTG CTGACAGACT TAAAAAATAA TTACTGA
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| Protein sequence | MSYSEDTIDF LHQGDLIGMQ NSLAKALKND NNEMLADLAE YLQMMGFIDE SQKIYDQIMS
EHPESTDYLI NLAEIAEDNG NLDEALNYLY QIPVDDENYI AALVKIADLY QYEGDFETAI
SKLEEARELS DSPLITFALA ESFFEQGDYS AAITEYAKLS ERKILHETKI SIYQRIGDSY
AQLGNFENAI SFLEKSFEFD EKPETLYKIA LLYGEIHNET RAIANFKRLE KMDVDFLNYE
LAYAQTLEAN QEFEAALEMA QKGLNKNPNA VPLLHFASKI SFKLKDKAAA ERYLMDALNL
PELHDETVFL LANLYFNEED FEAVINLEEL LEDEHLLAKW LFAGAHKALE KDSEATALYE
ELIQTNLSEN PEFLEDYIDF LKEIGQISKT EPIIEQYLEL DPDDENMRNL LTDLKNNY
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