| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1342 |
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| Symbol | |
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| ID | 4434012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1249142 |
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| End bp | 1251145 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639667076 |
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| Product | exoribonuclease R |
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| Protein accession | YP_809286 |
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| Protein GI | 116512070 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTCAGC TATCAGAATT AGCATCAGCA CTTAAACAAA CAGAAAGTAA AGGAGTATTT
TCTAAACATC CTAAAGGCTT TGGTTTTGTA CATCCAGAGG GTGAGACAGA CAAAACTAAT
GATATCTACA TCGGTCAAAA CGAAACTAAA TTTGCAATGG ATGGAGATAA GGTTACTGTT
AAGGTTTTAT ACCCTAAGAC AGAAAGACGG GGCGCAAGCG GACAAATTAT TAAAATCAAT
GAACGAGCAG TCGTTGATAC AGTTGGAACT TACCGTTCTT TATCTAATCG CCAAGCCAAA
GCTTTGGGAT ATAAAGGTCG AATCGAACTC TTTAATGACC GTATTTCAGA TACTCTTTAC
ATAAAACAGC CCTTAACAGG AGTACAAGAA GAAGATGTAG TAAGTATTAA AGTTACTCAA
TATCCAACAG ATACTAAAGC ATTTGAAGGA AAAATTACGC AAATCATTGG TCATAAAGGT
GAAGTTGGCC TTGATATCTT AGAAGTTTTG TATGCTATGA AAATTCCACA AGAATTCTCA
GCTGAAACAT TAGCTGAGGC TGAGTCATTT TCTGAAGAAT TAACCCAAGA AGACTTGCAA
GGACGTGAAG ACTATCGTAA TGAAATCACT TATACCATTG ATGGAGAGGA TTCTAAAGAT
TTAGATGATG CGATTCATGT TAAGAAATTA TCGAATGGAC ATTTTGAATT AGGGGTCCAC
ATTGCTGATG TCAGTCATTA TGTGACCGAA GGTTCTTCTT TGAATGAAGA AGCTTATGCG
CGAGCAACCT CGGTTTATGT GACTGATAGA GTAGTTCCAA TGTTACCTGT CAGATTGTCT
AATAACCTGT GCTCACTTAA TGAAGCTCAA GAACGGCTAA CAATGTCTTG CCTAATGGAA
ATTGATGATA AGGGCAAGAT TGTCACTTAT AAGATATCTC CATCAGTCAT AAAAACAACT
TACCGCATGA CTTATAGCAA TGTGAACAAG ATGATTCATC AGGGGCAAGA AGGACACCGC
GAAGCATTAG AAAAATTTTC TAAAATTGCT GATTCGATAG AAGTAGCCGT TGAACTTCAT
GAAATTCTCG AAACAATGCG AAAAGACAGA GGGATGATTG AGTTTGATGA GAGTGAAGCA
AAAATAATTT TAGATGATGA GGGTCACCCA ATTGAAATCG TAAAACGTGA CCGTGATACT
GCAGAACGCA TGATTGAATC CTTCATGCTT ATGGCAAATG AAACTGTTGC TCTTGATTTC
CAAAAGAAAA AATTACCTTC ATTGTATCGT GTCCATGAAA CTCCTAAGGA AAAAGCATTT
GCTAAATTGA TGGAAGCTGC TGCAGAAGCT GGATTTTCTT TGAGCTCTGA CTCTCATCAA
GCCATAAATT TCTTTGCTGA TGAGATTAAA GGTACAAGTT TTGAAAAAGC CTTAACTTAT
CAACTTCGTC ATACTATGTC AACAGCGGTT TATTCTGAAA AAAATACAAA ACATTTTGGA
CTTGCAGCGA CTAACTACAC ACATTTCACA AGTCCAATTA GACGTTATCC TGACCTAATT
ATTCATCGTT TATTACATTT ATATCCTTCT GACCATTCCA ACCGTACTAA GGATGAATGG
AAAGAACGTT TGCCTGAAAT TGCTAGTCAC TCTTCCGATA TGGAACACCG TGCTGTTGTC
ACTGAACGGA TTATTGATGC GATGAAGAAA GCAGAATACA TGTTAGAACG TATCGGTGAG
GTTTATACTG GTACGATCAC AGGAGTACAA AAGTTTGGTA TTTTTGTAGC ACTAGATAAT
ACCGTTGAAG GTTTAGTTCG AGTACCAAAT TTACATACTG GGACAACAGA AGAACTTGAA
TTTGACGAAG AAATGAGTAT TATTAAAGGG AAAAAATCGG AAACAATTTA TCAAGTTGGA
AAAGAAATAA AAATTCGTGT TATTGCTGCC AATAAACGAA AAGGAACAGT AGATTTTGAA
CAAATAGCTC CTGAAAAAAA CTAG
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| Protein sequence | MVQLSELASA LKQTESKGVF SKHPKGFGFV HPEGETDKTN DIYIGQNETK FAMDGDKVTV
KVLYPKTERR GASGQIIKIN ERAVVDTVGT YRSLSNRQAK ALGYKGRIEL FNDRISDTLY
IKQPLTGVQE EDVVSIKVTQ YPTDTKAFEG KITQIIGHKG EVGLDILEVL YAMKIPQEFS
AETLAEAESF SEELTQEDLQ GREDYRNEIT YTIDGEDSKD LDDAIHVKKL SNGHFELGVH
IADVSHYVTE GSSLNEEAYA RATSVYVTDR VVPMLPVRLS NNLCSLNEAQ ERLTMSCLME
IDDKGKIVTY KISPSVIKTT YRMTYSNVNK MIHQGQEGHR EALEKFSKIA DSIEVAVELH
EILETMRKDR GMIEFDESEA KIILDDEGHP IEIVKRDRDT AERMIESFML MANETVALDF
QKKKLPSLYR VHETPKEKAF AKLMEAAAEA GFSLSSDSHQ AINFFADEIK GTSFEKALTY
QLRHTMSTAV YSEKNTKHFG LAATNYTHFT SPIRRYPDLI IHRLLHLYPS DHSNRTKDEW
KERLPEIASH SSDMEHRAVV TERIIDAMKK AEYMLERIGE VYTGTITGVQ KFGIFVALDN
TVEGLVRVPN LHTGTTEELE FDEEMSIIKG KKSETIYQVG KEIKIRVIAA NKRKGTVDFE
QIAPEKN
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