| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1303 |
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| Symbol | |
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| ID | 4433938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1211334 |
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| End bp | 1212680 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639667041 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_809251 |
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| Protein GI | 116512035 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.642662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAAAA CACATATTAA TGTTATCGGA GCAGGCCTTG CCGGCTCTGA AGCCGCTTAT
CAAATTGCTA AACGCGGTAT CCCAGTAAAA ATTTACGAAA TGCGCGGTCT TAAACAGACC
CCTCAACATA AAACAGAAAA ATTTGCTGAA CTTGTTTGTT CAAATTCTCT TCGTGGAGCC
GCAATAACCA ACGCGGTTGG GCTCCTCAAA GAAGAAATGA GAAGACTCGA CTCAGTAATT
ATTAAAGCTG CTGAATACAC TCAAGTTCCT GCTGGTGGAG CTCTAGCCGT GGACAGAGAA
GGTTTTTCTG ATTTTGTTAC TAGAGAAGTA TCTAATCACC CATTAGTTGA GGTTATTCGT
GAAGAAATCA CTGACATTCC TCAAGATGAA TTGACGATTA TTGCAACCGG TCCCTTAACT
TCTGACAGCT TAGCAAATAA AATCCGTGAA TTTAATGGCG CTGATGGTTT TTACTTTTAT
GATGCGGCAG CTCCAATCAT TGATGCTAAT TCGATAAACT TTGATAAAGT TTATAAAAAA
TCACGTTATG ACAAGGGTGA AGCCGATTAT ATTAACTGTC CAATGACTAA AGAAGAATTT
CAAGCTTTTC AAGAAGCCTT GATTTCTGCA GAAGAAGCTC CTCTCAATTC TTTTGAGGAT
TTAAAAGTCT TTGAAGGCTG TATGCCCATT GAAGAAATGG CTAAACGTGG CTATAAAACA
ATGCTGTTTG GTCCCATGAA ACCTGTTGGA CTGGAATACC CATATGAATA CAAAGGTCCT
AGAGATGGCG AATTTAGAAC ACCTTATGCA GTTGTTCAAC TTCGCCAAGA TAATGCCTCC
GCCTCCTTAT ATAATATTGT CGGATTTCAA ACTCACTTAA AGTGGGGAGA ACAAAAACGA
GTTTTTCAAA TGATTCCAGG ACTCGAAAAT GCTGAATTCG TTCGCTACGG TGTAATGCAT
CGAAATTCTT ATATGGATTC CCCTAATCTT CTTAAACAAA CATTTCAATC ACGTAAACAA
GAAAATCTCT TTTTTGCTGG GCAAATGACA GGAGTAGAAG GATATGTTGA ATCGGCTGCC
TCTGGCTTAG TTGCTGGGAT CAATGCGGCT AAACTTTTTA ATGATGAAGA AGTGGTGATT
TTCCCTAAAA CAACTGCAAT TGGAAGCCTC CCTTACTACA TTACCCATAC TGATAGCAAA
CATTTCCAAC CGATGAATGT CACTTTTGGA ATTGTTGAGG AGTTAGATGG CCCACGGATT
CGTGATAAGA AAGAACGCTA TACAAAAGTT GCTGAACGTT CGTTAAATAC TTTAACAGAT
ATCATCTCAA AAGAAAATTT AGCATAA
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| Protein sequence | MRKTHINVIG AGLAGSEAAY QIAKRGIPVK IYEMRGLKQT PQHKTEKFAE LVCSNSLRGA
AITNAVGLLK EEMRRLDSVI IKAAEYTQVP AGGALAVDRE GFSDFVTREV SNHPLVEVIR
EEITDIPQDE LTIIATGPLT SDSLANKIRE FNGADGFYFY DAAAPIIDAN SINFDKVYKK
SRYDKGEADY INCPMTKEEF QAFQEALISA EEAPLNSFED LKVFEGCMPI EEMAKRGYKT
MLFGPMKPVG LEYPYEYKGP RDGEFRTPYA VVQLRQDNAS ASLYNIVGFQ THLKWGEQKR
VFQMIPGLEN AEFVRYGVMH RNSYMDSPNL LKQTFQSRKQ ENLFFAGQMT GVEGYVESAA
SGLVAGINAA KLFNDEEVVI FPKTTAIGSL PYYITHTDSK HFQPMNVTFG IVEELDGPRI
RDKKERYTKV AERSLNTLTD IISKENLA
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