Gene LACR_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1290 
Symbol 
ID4432326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp1198977 
End bp1200158 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content34% 
IMG OID639667030 
Productendoglucanase 
Protein accessionYP_809240 
Protein GI116512024 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2730] Endoglucanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00901224 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAA AAATTAAAGG AATTAATTTA GGTGGATGGC TTGTTTTAGA AAAATGGATG 
TCTCCTAAAC TTTTTGAAGA TGTAGCCGCA GAAGATGAAT ATTATTTGGC ACATGACTTA
TCTGAGAGTG AATATAAGGC ACGAATCAAA GTTCATCGCT CAGAGTTTAT AACAGAAACC
GATTTTTTAC GTCTTTCCTC AGCCGGATTT AATTTAATAC GAATTCCAGT TCCTTATTTT
ATTTTCGGAG ATCGCTTACC ATTTATCGGT TGTATTGAGG AATTAGATCG AGCGTTTAAC
TGGGCAGAAG CCTATGGGGT ACGTATTTTA TTAGATTTAC ATACAGCACC TTTTAGTCAA
AATGCATTTG ATAATGGCGG ATTATCCGGA GTTTGTAGAT GGGCACAAAT GCCAAAAGAA
GTTGAATTTG AATTAACAGT ATTAACAAGA TTAGCAGAAC GCTATAAAAA TCATGCTGCT
TTATGGGGAA TCGAAGTGAT TAATGAGCCA ATTACTGAAC GTATTTGGAA AATGATGAAT
CCTCAAAAAC GATATATTCC TCGAGATTTA AAACTGGCTG TTGACAGTGC ACCTATATCG
TTAGAGTTTC TACAAGAATT TTATAAAGAA GCATATTTCC GCTTAAGAAA CATACTTCCA
GAAGAGACGG TTATTTCATT TCATGATGGT TTTGAACTAC ATTCTTGGAA GGAATTTTTT
AAAGAAAATG ACTTTAAAAA TGTCATGTTA GATACCCACC AATATGTGAT GATTGCAGAA
TTAAAAGGAA CACCGCAAAG TTTAGAAGCT TATAAAGTGT ATCTGGACGA TTTAGGAAAG
CAAATTGCCG AGGTACAAAA ATATGTTCCT GTTTTTGTAG GGGAATGGTC ACTTTTTAAT
TCGTATACTG CTGGAGTTGA TACAAAAGGA GGAATCAATC CGACTCAAGA AGAATTTTTA
GATAAAAAAA TAATGTCAAA AAATGAATTA GCAATGACTT ATTTAGAACT ATGGAATGCT
TCAGTGAAAG CTTGGAACCA AGGTGAAGGT CATATTTATT GGACTTATAA ATTAAATATT
GATACTGTAA ATGAACCAGC GTGGTATGGT TGGGATTCAT GGGATATGAG CCGTTGCTTA
ATTAATCAGT GGGTTGATCC AATGAATGAT ATAAAATATT AG
 
Protein sequence
MTEKIKGINL GGWLVLEKWM SPKLFEDVAA EDEYYLAHDL SESEYKARIK VHRSEFITET 
DFLRLSSAGF NLIRIPVPYF IFGDRLPFIG CIEELDRAFN WAEAYGVRIL LDLHTAPFSQ
NAFDNGGLSG VCRWAQMPKE VEFELTVLTR LAERYKNHAA LWGIEVINEP ITERIWKMMN
PQKRYIPRDL KLAVDSAPIS LEFLQEFYKE AYFRLRNILP EETVISFHDG FELHSWKEFF
KENDFKNVML DTHQYVMIAE LKGTPQSLEA YKVYLDDLGK QIAEVQKYVP VFVGEWSLFN
SYTAGVDTKG GINPTQEEFL DKKIMSKNEL AMTYLELWNA SVKAWNQGEG HIYWTYKLNI
DTVNEPAWYG WDSWDMSRCL INQWVDPMND IKY